@TOME V3
(Feb 2022)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : H_NR1D1_REVa: (2021-05-27 )
MTTLDSNNNTGGVITYIGSSGSSPSRTSPESLYSDNSNGSFQSLTQGCPTYFPPSPTGSLTQDPARSFGSIPPSLSDDGSPSSSSSSSSSSSSFYNGSPPGSLQVAMEDSSRVSPSKSTSNITKLNGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQSAMNLANNQLSSQCPLETSPTQHPTPGPMGPSPPPAPVPSPLVGFSQFPQQLTPPRSPSPEPTVEDVISQVARAHREIFTYAHDKLGSSPGNFNANHASGSPPATTPHRWENQGCPPAPNDNNTLAAQRHNEALNGLRQAPSSYPPTWPPGPAHHSCHQSNSNGHRLCPTHVYAAPEGKAPANSPRQGNSKNVLLACPMNMYPHGRSGRTVQEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAGTFEVLMVRFASLFNVKDQTVMFLSRTTYSLQELGAMGMGDLLSAMFDFSEKLNSLALTEEELGLFTAVVLVSADRSGMENSASVEQLQETLLRALRALVLKNRPLETSRFTKLLLKLPDLRTLNNMHSEKLLSFRVDAQ
Atome Classification :
(20 SA)
.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.---......600.......610..
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
MTTLDSNNNT
G
G
V
I
T
Y
IGSSGSSPSRTS
P
E
S
LYSDNSNG
S
F
Q
S
L
TQGCPTYFPPSPTGSL
T
Q
D
P
A
R
S
FGSIPPSLSDDGSPSSSSSSSSSSSSFYNGSPPG
S
L
Q
V
A
MEDSSRVSPSKSTSNITKLNG
M
V
L
L
C
K
V
C
G
D
V
A
S
G
F
H
Y
G
V
H
A
C
E
G
C
K
G
F
F
R
R
S
I
Q
Q
N
I
Q
Y
K
R
CLKNEN
C
S
I
V
R
I
N
R
N
R
C
Q
Q
C
R
F
K
K
C
L
S
VGMSR
D
A
V
RFGRI
P
K
R
E
K
Q
R
M
L
A
E
M
Q
S
A
M
N
L
A
NNQLSSQCPLETSPTQHPTPGPMGPSPPPAPVPSPL
V
G
F
S
QF
P
Q
Q
LTPPRSPSPEP
T
V
E
D
V
I
S
Q
V
A
R
A
H
R
E
I
F
T
Y
A
H
D
KLGSSPGNFNANHASGSPPATTPHRWENQGCPPAPNDNN
T
L
A
A
Q
R
H
N
E
A
L
N
G
L
R
QAPSSYPPTWPPGPAHHSCHQSNSNG
H
R
LCPT
H
V
Y
AAPEGKAPANSPRQGNSK
N
V
L
L
ACPMNMYPHGRSGR
T
V
Q
E
I
W
E
DFSMSF
T
P
A
V
R
E
V
V
E
F
A
K
HIPG
F
R
DLSQHD
Q
V
T
L
L
KAG
T
F
E
V
L
M
V
R
F
A
S
L
FNVKD
Q
T
V
M
F
L
SRTT
Y
S
L
Q
E
L
GAM
G
M
G
D
L
L
S
A
M
F
D
F
S
E
K
L
N
S
LAL
T
E
E
E
L
G
L
F
T
A
V
V
L
V
SADRSGMENSA
S
V
E
Q
L
Q
E
T
L
L
R
A
L
R
A
L
V
LKNRPL
E
T
S
R
F
T
K
L
L
L
KLP---D
L
R
T
L
N
N
M
H
S
E
K
L
L
S
F
RVDAQ
2
PsiBlast_PDB
91.07
71%
-173
- C2 -
-
4N73
1
A:
[3-198]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
V
C
P
M
S
K
S
P
Y
V
D
P
H
K
S
G
H
E
I
W
E
E
F
S
M
S
F
T
P
A
V
K
E
V
V
E
F
A
K
R
I
P
G
F
R
D
L
S
Q
H
D
Q
V
N
L
L
K
A
G
T
F
E
V
L
M
V
R
F
A
S
L
F
D
A
K
E
R
T
V
T
F
L
S
G
K
K
Y
S
V
D
D
L
H
S
M
G
A
G
D
L
L
N
S
M
F
E
F
S
E
K
L
N
A
L
Q
L
S
D
E
E
M
S
L
F
T
A
V
V
L
V
S
A
D
R
S
G
I
E
N
V
N
S
V
E
A
L
Q
E
T
L
I
R
A
L
R
T
L
I
M
K
N
H
P
N
E
A
S
I
F
T
K
L
L
L
K
L
P
---
D
L
R
S
L
N
N
M
H
S
E
E
L
L
A
F
K
V
---
4
PsiBlast_PDB
88.93
68%
-170
- C2 -
-
3CQV
1
A:
[2-196]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
V
C
P
M
S
K
S
P
Y
V
D
P
H
K
S
G
H
E
I
W
E
E
F
S
M
S
F
T
P
A
V
K
E
V
V
E
F
A
K
R
I
P
G
F
R
D
L
S
Q
H
D
Q
V
N
L
L
K
A
G
T
F
E
V
L
M
V
R
F
A
S
L
F
D
A
K
E
R
T
V
T
F
L
S
G
K
K
Y
S
V
D
D
L
H
S
M
G
A
G
D
L
L
N
S
M
F
E
F
S
E
K
L
N
A
L
Q
L
S
D
E
E
M
S
L
F
T
A
V
V
L
V
S
A
D
R
S
G
I
E
N
V
N
S
V
E
A
L
Q
E
T
L
I
R
A
L
R
T
L
I
M
K
N
H
P
N
E
A
S
I
F
T
K
L
L
L
K
L
P
---
D
L
R
S
L
N
N
M
H
S
E
E
L
L
A
F
K
----
3
PsiBlast_PDB
81.67
73%
-169
- C2 -
-
2V0V
-
NR1D2_HUMAN
A:
[396-576]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
S
G
---
H
E
I
W
E
E
F
S
M
S
F
T
P
A
V
K
E
V
V
E
F
A
K
R
I
P
G
F
R
D
L
S
Q
H
D
Q
V
N
L
L
K
A
G
T
F
E
V
L
M
V
R
F
A
S
L
F
D
A
K
E
R
T
V
T
F
L
G
S
K
K
Y
S
V
D
D
L
H
S
M
G
A
G
D
L
L
N
S
M
F
E
F
S
E
K
L
N
A
L
Q
L
S
D
E
E
M
S
L
F
T
A
V
V
L
V
S
A
D
R
S
G
I
E
N
V
N
S
V
E
A
L
Q
E
T
L
I
R
A
L
R
T
L
I
M
K
N
H
P
N
E
A
S
I
F
T
K
L
L
L
K
L
P
---
D
L
R
S
L
N
N
M
H
S
E
E
L
L
A
F
K
----
17
PsiBlast_PDB
76.80
39%
-192
- C2 -
-
1S0X
1
A:
[66-239]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
W
Q
L
C
A
I
K
I
T
E
A
I
Q
Y
V
V
E
F
A
K
R
I
D
G
F
M
E
L
C
Q
N
D
Q
I
V
L
L
K
A
G
S
L
E
V
V
F
I
R
M
C
R
A
F
D
S
Q
N
N
T
V
Y
F
D
G
K
Y
A
-
S
P
D
V
F
K
S
L
G
C
E
D
F
I
S
F
V
F
E
F
G
K
S
L
C
S
M
H
L
T
E
D
E
I
A
L
F
S
A
F
V
L
M
S
A
D
R
S
W
L
Q
E
K
V
K
I
E
K
L
Q
Q
K
I
Q
L
A
L
Q
H
V
L
Q
K
N
H
R
-
E
D
G
I
L
T
K
L
I
C
K
V
S
---
T
L
R
A
L
C
G
R
H
T
E
K
L
M
A
F
K
----
16
PsiBlast_PDB
75.14
39%
-187
- C2 -
-
1N83
1
A:
[66-239]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
W
Q
L
C
A
I
K
I
T
E
A
I
Q
Y
V
V
E
F
A
K
R
I
D
G
F
M
E
L
C
Q
N
D
Q
I
V
L
L
K
A
G
S
L
E
V
V
F
I
R
M
C
R
A
F
D
S
Q
N
N
T
V
Y
F
D
G
K
Y
A
-
S
P
D
V
F
K
S
L
G
C
E
D
F
I
S
F
V
F
E
F
G
K
S
L
C
S
M
H
L
T
E
D
E
I
A
L
F
S
A
F
V
L
M
S
A
D
R
S
W
L
Q
E
K
V
K
I
E
K
L
Q
Q
K
I
Q
L
A
L
Q
H
V
L
Q
K
N
H
R
-
E
D
G
I
L
T
K
L
I
C
K
V
S
---
T
L
R
A
L
C
G
R
H
T
E
K
L
M
A
F
K
----
15
PsiBlast_PDB
73.22
39%
-183
- C2 -
-
4S15
2
RORA_HUMAN
A:
[52-225]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
W
Q
L
C
A
I
K
I
T
E
A
I
Q
Y
V
V
E
F
A
K
R
I
D
G
F
M
E
L
C
Q
N
D
Q
I
V
L
L
K
A
G
S
L
E
V
V
F
I
R
M
C
R
A
F
D
S
Q
N
N
T
V
Y
F
D
G
K
Y
A
-
S
P
D
V
F
K
S
L
G
C
E
D
F
I
S
F
V
F
E
F
G
K
S
L
C
S
M
H
L
T
E
D
E
I
A
L
F
S
A
F
V
L
M
S
A
D
R
S
W
L
Q
E
K
V
K
I
E
K
L
Q
Q
K
I
Q
L
A
L
Q
H
V
L
Q
K
N
H
R
-
E
D
G
I
L
T
K
L
I
C
K
V
S
---
T
L
R
A
L
C
G
R
H
T
E
K
L
M
A
F
K
----
18
PsiBlast_PDB
72.00
37%
-178
- C2 -
-
6J1L
1
RORG_HUMAN
A:
[67-247]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
Y
Q
R
K
S
M
W
E
M
W
E
R
C
A
H
H
L
T
E
A
I
Q
Y
V
V
E
F
A
K
R
L
S
G
F
M
E
L
C
Q
N
D
Q
I
V
L
L
K
A
G
A
M
E
V
V
L
V
R
M
C
R
A
Y
N
A
D
N
R
T
V
F
F
E
G
K
Y
G
-
G
M
E
L
F
R
A
L
G
C
S
E
L
I
S
S
I
F
D
F
S
H
S
L
S
A
L
H
F
S
E
D
E
I
A
L
Y
T
A
L
V
L
I
N
A
H
R
P
G
L
Q
E
K
R
K
V
E
Q
L
Q
Y
N
L
E
L
A
F
------
H
H
H
L
E
K
T
H
R
Q
S
I
L
A
K
L
P
PKG
K
L
R
S
L
C
S
Q
H
V
E
R
L
Q
I
F
Q
----
5
PsiBlast_PDB
71.44
69%
-160
- C2 -
-
2V7C
-
NR1D2_HUMAN
A:
[403-576]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
E
F
S
M
S
F
T
P
A
V
K
E
V
V
E
F
A
K
R
I
P
G
F
R
D
L
S
Q
H
D
Q
V
N
L
L
K
A
G
T
F
E
V
L
M
V
R
F
A
S
L
F
D
A
K
E
R
T
V
T
F
L
S
G
K
K
Y
S
---------
G
D
L
L
N
S
M
F
E
F
S
E
K
L
N
A
L
Q
L
S
D
E
E
M
S
L
F
T
A
V
V
L
V
S
A
D
R
S
G
I
E
N
V
N
S
V
E
A
L
Q
E
T
L
I
R
A
L
R
T
L
I
M
K
N
H
P
N
E
A
S
I
F
T
K
L
L
L
K
L
P
---
D
L
R
S
L
N
N
M
H
S
E
E
L
L
A
F
K
----
20
PsiBlast_PDB
69.74
37%
-162
- C2 -
-
5IZ0
1
A:
[51-231]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
Y
Q
R
K
S
M
W
E
M
W
E
R
C
A
H
H
L
T
E
A
I
Q
Y
V
V
E
F
A
K
R
L
S
G
F
M
E
L
C
Q
N
D
Q
I
V
L
L
K
A
G
A
M
E
V
V
L
V
R
M
C
R
A
Y
N
A
D
N
R
T
V
F
F
E
G
K
Y
G
-
G
M
E
L
F
R
A
L
G
C
S
E
L
I
S
S
I
F
D
F
S
H
S
L
S
A
L
H
F
S
E
D
E
I
A
L
Y
T
A
L
V
L
I
N
A
H
R
P
G
L
Q
E
K
R
K
V
E
Q
L
Q
Y
N
L
-----
E
L
A
F
H
H
H
L
C
K
T
H
R
-
Q
S
I
L
A
K
L
P
PKG
K
L
R
S
L
C
S
Q
H
V
E
R
L
Q
I
F
Q
----
12
PsiBlast_PDB
69.24
40%
-185
* C2 *
-
1N4H
1
RORB_RAT
A:
[58-231]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
W
Q
Q
C
A
I
Q
I
T
H
A
I
Q
Y
V
V
E
F
A
K
R
I
T
G
F
M
E
L
C
Q
N
D
Q
I
L
L
L
K
S
G
C
L
E
V
V
L
V
R
M
C
R
A
F
N
P
L
N
N
T
V
L
F
E
G
K
Y
G
-
G
M
Q
M
F
K
A
L
G
S
D
D
L
V
N
E
A
F
D
F
A
K
N
L
C
S
L
Q
L
T
E
E
E
I
A
L
F
S
S
A
V
L
I
S
P
D
R
A
W
L
L
E
P
R
K
V
Q
K
L
Q
E
K
I
Y
F
A
L
Q
H
V
I
Q
K
N
H
-
L
D
D
E
T
L
A
K
L
I
A
K
I
P
---
T
I
T
A
V
C
N
L
H
G
E
K
L
Q
V
F
K
----
13
PsiBlast_PDB
68.44
40%
-185
- C2 -
-
1K4W
1
RORB_RAT
A:
[58-231]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
W
Q
Q
C
A
I
Q
I
T
H
A
I
Q
Y
V
V
E
F
A
K
R
I
T
G
F
M
E
L
C
Q
N
D
Q
I
L
L
L
K
S
G
C
L
E
V
V
L
V
R
M
C
R
A
F
N
P
L
N
N
T
V
L
F
E
G
K
Y
G
-
G
M
Q
M
F
K
A
L
G
S
D
D
L
V
N
E
A
F
D
F
A
K
N
L
C
S
L
Q
L
T
E
E
E
I
A
L
F
S
S
A
V
L
I
S
P
D
R
A
W
L
L
E
P
R
K
V
Q
K
L
Q
E
K
I
Y
F
A
L
Q
H
V
I
Q
K
N
H
-
L
D
D
E
T
L
A
K
L
I
A
K
I
P
---
T
I
T
A
V
C
N
L
H
G
E
K
L
Q
V
F
K
----
14
PsiBlast_PDB
68.35
40%
-187
- C2 -
-
1NQ7
1
RORB_RAT
A:
[51-224]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
W
Q
Q
C
A
I
Q
I
T
H
A
I
Q
Y
V
V
E
F
A
K
R
I
T
G
F
M
E
L
C
Q
N
D
Q
I
L
L
L
K
S
G
C
L
E
V
V
L
V
R
M
C
R
A
F
N
P
L
N
N
T
V
L
F
E
G
K
Y
G
-
G
M
Q
M
F
K
A
L
G
S
D
D
L
V
N
E
A
F
D
F
A
K
N
L
C
S
L
Q
L
T
E
E
E
I
A
L
F
S
S
A
V
L
I
S
P
D
R
A
W
L
L
E
P
R
K
V
Q
K
L
Q
E
K
I
Y
F
A
L
Q
H
V
I
Q
K
N
H
-
L
D
D
E
T
L
A
K
L
I
A
K
I
P
---
T
I
T
A
V
C
N
L
H
G
E
K
L
Q
V
F
K
----
19
PsiBlast_PDB
66.69
38%
-163
- C2 -
-
6CN6
1
RORG_HUMAN
A:
[49-229]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
Y
Q
R
K
S
M
W
E
M
W
E
R
C
A
H
H
L
T
E
A
I
Q
Y
V
V
E
F
A
K
R
L
S
G
F
M
E
L
S
Q
N
D
Q
I
V
L
L
K
A
G
A
M
E
V
V
L
V
R
M
C
R
A
Y
N
A
D
N
R
T
V
F
F
E
G
K
Y
G
-
G
M
E
L
F
R
A
L
G
C
S
E
L
I
S
S
I
F
D
F
S
H
S
L
S
A
L
H
F
S
E
D
E
I
A
L
Y
T
A
L
V
L
I
N
A
H
R
P
G
L
Q
E
K
R
K
V
E
Q
L
Q
Y
N
L
-----
E
L
A
F
H
H
H
L
C
K
T
H
R
-
Q
S
I
L
A
K
L
P
PKG
K
L
R
S
L
C
S
Q
H
V
E
R
L
Q
I
F
Q
----
1
PsiBlast_PDB
44.49
100%
42
- C2 -
-
3N00
-
NR1D1_HUMAN
A:
[20-242]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
P
H
G
R
S
G
R
T
V
Q
E
I
W
E
D
F
S
M
S
F
T
P
A
V
R
E
V
V
E
F
A
K
H
I
P
G
F
R
D
L
S
Q
H
D
Q
V
T
L
L
K
A
G
T
F
E
V
L
M
V
R
F
A
S
L
F
N
V
K
D
Q
T
--------------
G
A
M
G
M
G
D
L
L
S
A
M
F
D
F
S
E
K
L
N
S
L
A
L
T
E
E
E
L
G
L
F
T
A
V
V
L
V
S
A
D
R
S
G
M
E
N
S
A
S
V
E
Q
L
Q
E
T
L
L
R
A
L
R
A
L
V
L
K
N
R
P
L
E
T
S
R
F
T
K
L
L
L
K
L
P
---
D
L
R
T
L
N
N
M
H
S
E
K
L
L
S
F
R
V
D
A
-
11
PsiBlast_PDB
29.63
59%
-163
- C1 -
-
3E00
-
PPARG_HUMAN
D:
[49-155]
-------------------------------------------------------------------------------------------------------------------------------
M
A
I
E
C
R
V
C
G
D
K
A
S
G
F
H
Y
G
V
H
A
C
E
G
C
K
G
F
F
R
R
T
I
R
L
K
L
I
Y
D
R
C
--
D
L
N
C
R
I
H
K
K
S
R
N
K
C
Q
Y
C
R
F
Q
K
C
L
A
V
G
M
S
H
N
A
I
R
F
G
R
M
P
Q
A
E
K
E
K
L
L
A
E
I
S
S
D
I
D
Q
L
N
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
27.99
59%
-154
- C1 -
-
3DZU
-
PPARG_HUMAN
D:
[50-158]
--------------------------------------------------------------------------------------------------------------------------------
A
I
E
C
R
V
C
G
D
K
A
S
G
F
H
Y
G
V
H
A
C
E
G
C
K
G
F
F
R
R
T
I
R
L
K
L
I
Y
D
R
C
--
D
L
N
C
R
I
H
K
K
S
R
N
K
C
Q
Y
C
R
F
Q
K
C
L
A
V
G
M
S
H
N
A
I
R
F
G
R
M
P
Q
A
E
K
E
K
L
L
A
E
I
S
S
D
I
D
Q
L
N
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
27.41
98%
-166
- C1 -
-
1HLZ
-
NR1D1_HUMAN
A:
[7-87]
--------------------------------------------------------------------------------------------------------------------------------
V
L
L
C
K
V
C
G
D
V
A
S
G
F
H
Y
G
V
L
A
C
E
G
C
K
G
F
F
R
R
S
I
Q
Q
N
I
Q
Y
K
R
C
L
K
N
E
N
C
S
I
V
R
I
N
R
N
R
C
Q
Q
C
R
F
K
K
C
L
S
V
G
M
S
R
D
A
V
R
F
G
R
I
P
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
PsiBlast_PDB
26.73
59%
-146
* C1 *
-
3DZY
-
PPARG_HUMAN
D:
[50-163]
--------------------------------------------------------------------------------------------------------------------------------
A
I
E
C
R
V
C
G
D
K
A
S
G
F
H
Y
G
V
H
A
C
E
G
C
K
G
F
F
R
R
T
I
R
L
K
L
I
Y
D
R
C
--
D
L
N
C
R
I
H
K
K
S
R
N
K
C
Q
Y
C
R
F
Q
K
C
L
A
V
G
M
S
H
N
A
I
R
F
G
R
M
P
Q
A
E
K
E
K
L
L
A
E
I
S
S
D
I
D
Q
L
N
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
25.34
98%
-152
- C1 -
-
1A6Y
-
NR1D1_HUMAN
A:
[8-85]
---------------------------------------------------------------------------------------------------------------------------------
L
L
C
K
V
C
G
D
V
A
S
G
F
H
Y
G
V
L
A
C
E
G
C
K
G
F
F
R
R
S
I
Q
Q
N
I
Q
Y
K
R
C
L
K
N
E
N
C
S
I
V
R
I
N
R
N
R
C
Q
Q
C
R
F
K
K
C
L
S
V
G
M
S
R
D
A
V
R
F
G
R
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
24.68
98%
-146
- C1 -
-
1GA5
-
?
A:
[7-88]
--------------------------------------------------------------------------------------------------------------------------------
V
L
L
C
K
V
C
G
D
V
A
S
G
F
H
Y
G
V
L
A
C
E
G
C
K
G
F
F
R
R
S
I
Q
Q
N
I
Q
Y
K
R
C
L
K
N
E
N
C
S
I
V
R
I
N
R
N
R
C
Q
Q
C
R
F
K
K
C
L
S
V
G
M
S
R
D
A
V
R
F
G
R
I
P
K
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------