@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : DUSTY_HUMAN: (2021-11-22 )
MEGDGVPWGSEPVSGPGPGGGGMIRELCRGFGRYRRYLGRLRQNLRETQKFFRDIKCSHNHTCLSSLTGGGGAERGPAGDVAETGLQAGQLSCISFPPKEEKYLQQIVDCLPCILILGQDCNVKCQLLNLLLGVQVLPTTKLGSEESCKLRRLRFTYGTQTRVSLALPGQYELVHTLVAHQGNWETIPEEDLEVQENNEDAAHVLAELEVTMHHALLQEVDVVVAPCQGLRPTVDVLGDLVNDFLPVITYALHKDELSERDEQELQEIRKYFSFPVFFFKVPKLGSEIIDSSTRRMESERSPLYRQLIDLGYLSSSHWNCGAPGQDTKAQSMLVEQSEKLRHLSTFSHQVLQTRLVDAAKALNLVHCHCLDIFINQAFDMQRDLQITPKRLEYTRKKENELYESLMNIANRKQEEMKDMIVETLNTMKEELLDDATNMEFKDVIVPENGEPVGTREIKCCIRQIQELIISRLNQAVANKLISSVDYLRESFVGTLERCLQSLEKSQDVSVHITSNYLKQILNAAYHVEVTFHSGSSVTRMLWEQIKQIIQRITWVSPPAITLEWKRKVAQEAIESLSASKLAKSICSQFRTRLNSSHEAFAASLRQLEAGHSGRLEKTEDLWLRVRKDHAPRLARLSLESCSLQDVLLHRKPKLGQELGRGQYGVVYLCDNWGGHFPCALKSVVPPDEKHWNDLALEFHYMRSLPKHERLVDLHGSVIDYNYGGGSSIAVLLIMERLHRDLYTGLKAGLTLETRLQIALDVVEGIRFLHSQGLVHRDIKLKNVLLDKQNRAKITDLGFCKPEAMMSGSIVGTPIHMAPELFTGKYDNSVDVYAFGILFWYICSGSVKLPEAFERCASKDHLWNNVRRGARPERLPVFDEECWQLMEACWDGDPLKRPLLGIVQPMLQGIMNRLCKSNSEQPNRGLDDST

Atome Classification :

(39 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

4TT_A_2(3VID)

[Raw transfer]




STU_F_6(2OIC)
IRAK4_HUMAN
[Raw transfer]




STU_E_5(2OIC)
IRAK4_HUMAN
[Raw transfer]




GUI_A_2(4E93)

[Raw transfer]




3L0_A_3(4RA5)
KPCT_HUMAN
[Raw transfer]




JX4_D_9(6MOM)
?
[Raw transfer]




5VS_A_3(5F9E)
KPCT_HUMAN
[Raw transfer]




5VS_B_4(5F9E)

[Raw transfer]




PZW_B_5(4Q9Z)

[Raw transfer]




JX4_B_6(6MOM)
?
[Raw transfer]




9FC_A_4(6JMF)

[Raw transfer]




3KZ_A_2(4RA4)

[Raw transfer]




9FC_A_4(6JMF)

[Raw transfer]




3L0_B_7(4RA5)

[Raw transfer]




STU_B_2(1XJD)

[Raw transfer]




38O_B_10(5A46)

[Raw transfer]




C58_B_18(3ZH8)
KPCI_HUMAN
[Raw transfer]




ANP_E_5(2OID)
IRAK4_HUMAN
[Raw transfer]




C58_A_9(3ZH8)
KPCI_HUMAN
[Raw transfer]




PZW_A_3(4Q9Z)
KPCT_HUMAN
[Raw transfer]




F82_A_3(6GQJ)
?
[Raw transfer]




PP2_A_2(3SXS)

[Raw transfer]




748_A_2(5GRN)

[Raw transfer]




8ST_A_2(3HNG)

[Raw transfer]




F88_A_3(6GQK)
?
[Raw transfer]




1N1_A_3(3SXR)
BMX_HUMAN
[Raw transfer]




EDO_B_9(5A46)

[Raw transfer]




A6S_B_9(5WDY)
WNK1_HUMAN
[Raw transfer]




ANP_B_8(5WDY)
WNK1_HUMAN
[Raw transfer]




EDO_B_7(6MOM)
?
[Raw transfer]




EDO_D_10(6MOM)
?
[Raw transfer]




228 Fugue 74.8518% -19 - C3 -3C4Z - GRK1_BOVIN -
225 Fugue 65.8418% 25 * C3 *2ACX - GRK6_HUMAN -
3 PsiBlast_PDB 62.9130% -17 - C5 -3CBL - -
2 PsiBlast_PDB 62.8630% -19 - C5 -3BKB - -
5 PsiBlast_PDB 62.7230% -18 - C5 -6JMF 6.8
224 Fugue 62.4524% -5 - C5 -3CD3 - -
222 Fugue 60.6118% 14 - C3 -4BTF - MLKL_MOUSE -
1 PsiBlast_PDB 60.1830% -4 - C5 -3CD3 - -
7 PsiBlast_PDB 59.9727% -45 - C5 -3PPZ - CTR1_ARATH -
211 HHSearch 59.7228% -34 - C5 -3BKB - -
4 PsiBlast_PDB 59.7030% -19 - C5 -4E93 8.4
10 PsiBlast_PDB 59.5929% -52 - C5 -3SXS 6.9
212 HHSearch 59.4828% -32 - C5 -3CBL - -
210 HHSearch 59.3728% -33 - C5 -6JMF 7.0
9 PsiBlast_PDB 58.8729% -51 - C5 -3SXR 4.6 BMX_HUMAN
214 HHSearch 58.7327% -5 - C5 -5A46 4.6
234 Fugue 58.2711% -13 - C2 -2J69 - BDLP_NOSP7 -
203 HHSearch 57.4026% -4 - C5 -2PSQ - FGFR2_HUMAN -
11 PsiBlast_PDB 56.7927% -5 - C5 -6GQK 7.2 ?
14 PsiBlast_PDB 56.7828% -18 - C5 -6GQJ 7.7 ?
194 Blastp_CBE 44.8831% -63 - C5 -3ZH8 8.8 KPCI_HUMAN
193 Blastp_CBE 44.6131% -63 - C5 -3ZH8 6.6 KPCI_HUMAN
171 Blastp_CBE 42.7733% -94 - C5 -3VID Error
144 Blastp_CBE 40.5533% -41 - C5 -5GRN 4.6
185 Blastp_CBE 39.2432% -74 - C5 -3HNG 3.6
133 Blastp_CBE 39.0831% -19 - C5 -6MOM 7.1 ?
131 Blastp_CBE 38.1031% -28 - C5 -6MOM 7.4 ?
123 Blastp_CBE 37.5131% -14 - C5 -2OIC 7.6 IRAK4_HUMAN
119 Blastp_CBE 37.3531% -25 - C5 -2OID 3.9 IRAK4_HUMAN
122 Blastp_CBE 36.3131% -13 - C5 -2OIC 7.4 IRAK4_HUMAN
30 Blastp_CBE 36.2945%-140 - C5 -4RA5 3.2 KPCT_HUMAN
29 Blastp_CBE 36.1445%-139 - C5 -4RA5 3.0
31 Blastp_CBE 35.7645%-138 - C5 -4Q9Z 2.9
32 Blastp_CBE 35.4845%-138 - C5 -4Q9Z 3.1 KPCT_HUMAN
26 Blastp_CBE 35.3545%-132 - C5 -5F9E 5.1 KPCT_HUMAN
33 Blastp_CBE 35.1845%-137 - C5 -1XJD 4.0
25 Blastp_CBE 35.1645%-135 - C5 -5F9E 3.9
186 Blastp_CBE 33.8742%-138 - C5 -4RA4 4.0
181 Blastp_CBE 31.9932% -96 - C5 -5WDY 4.1 WNK1_HUMAN