@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : TAF1_HUMAN: (2021-11-23 )
MGPGCDLLLRTAATITAAAIMSDTDSDEDSAGGGPFSLAGFLFGNINGAGQLEGESVLDDECKKHLAGLGALGLGSLITELTANEELTGTDGALVNDEGWVRSTEDAVDYSDINEVAEDESRRYQQTMGSLQPLCHSDYDEDDYDADCEDIDCKLMPPPPPPPGPMKKDKDQDSITGEKVDFSSSSDSESEMGPQEATQAESEDGKLTLPLAGIMQHDATKLLPSVTELFPEFRPGKVLRFLRLFGPGKNVPSVWRSARRKRKKKHRELIQEEQIQEVECSVESEVSQKSLWNYDYAPPPPPEQCLSDDEITMMAPVESKFSQSTGDIDKVTDTKPRVAEWRYGPARLWYDMLGVPEDGSGFDYGFKLRKTEHEPVIKSRMIEEFRKLEENNGTDLLADENFLMVTQLHWEDDIIWDGEDVKHKGTKPQRASLAGWLPSSMTRNAMAYNVQQGFAATLDDDKPWYSIFPIDNEDLVYGRWEDNIIWDAQAMPRLLEPPVLTLDPNDENLILEIPDEKEEATSNSPSKESKKESSLKKSRILLGKTGVIKEEPQQNMSQPEVKDPWNLSNDEYYYPKQQGLRGTFGGNIIQHSIPAVELRQPFFPTHMGPIKLRQFHRPPLKKYSFGALSQPGPHSVQPLLKHIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYYKRKPGKDPGAPDCKYGETVYCHTSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQGYYIRELVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLLAAGSAASGNNHRDDDTASVTSLNSSATGRCLKIYRTFRDEEGKEYVRCETVRKPAVIDAYVRIRTTKDEEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPGPYTPQPPDLYDTNTSLSMSRDASVFQDESNMSVLDIPSATPEKQVTQEGEDGDGDLADEEEGTVQQPQASVLYEDLLMSEGEDDEEDAGSDEEGDNPFSAIQLSESGSDSDVGSGGIRPKQPRMLQENTRMDMENEESMMSYEGDGGEASHGLEDSNISYGSYEEPDPKSNTQDTSFSSIGGYEVSEEEEDEEEEEQRSGPSVLSQVHLSEDEEDSEDFHSIAGDSDLDSDE

Atome Classification :

(40 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

67B_A_2(5I29)

[Raw transfer]



67B_A_2(5I29)

[Raw transfer]



67C_A_2(5I1Q)

[Raw transfer]



69G_A_3(6BQD)
TAF1_HUMAN
[Raw transfer]



67C_A_2(5I1Q)

[Raw transfer]



B8O_A_3(6J3P)
KAT2A_HUMAN
[Raw transfer]



96V_D_10(5V84)

[Raw transfer]



96V_A_6(5V84)
CECR2_HUMAN
[Raw transfer]



69G_B_4(6BQD)

[Raw transfer]



G9Y_A_2(6DF4)
?
[Raw transfer]



96V_C_8(5V84)
CECR2_HUMAN
[Raw transfer]



G9V_B_4(6DF7)
?
[Raw transfer]



B8O_B_4(6J3P)

[Raw transfer]



7M8_A_5(5MG2)

[Raw transfer]



GOL_A_4(3UV4)
TAF1_HUMAN
[Raw transfer]



G9V_A_3(6DF7)
?
[Raw transfer]



9ST_B_6(5MLJ)

[Raw transfer]



96V_B_7(5V84)
CECR2_HUMAN
[Raw transfer]



9ST_A_4(5MLJ)
KAT2A_HUMAN
[Raw transfer]



EDO_A_3(3NXB)
CECR2_HUMAN
[Raw transfer]



BMF_A_2(5IGL)

[Raw transfer]



EDO_B_5(3NXB)

[Raw transfer]



EDO_B_6(3UV4)

[Raw transfer]



DKH_T_3(6FIC)

[Raw transfer]
542 HHSearch 86.00100% -93 - C11 -6MZL - TAF1_HUMAN -
1 PsiBlast_PDB 86.00100% -93 - C9 -6MZL - TAF1_HUMAN -
544 HHSearch 84.49100% -94 - C11 -6MZM - -
5 PsiBlast_PDB 84.49100% -94 - C11 -6MZM - -
541 HHSearch 77.36100% -88 - C11 -5FUR - TAF1_HUMAN -
543 HHSearch 77.33100% -88 - C11 -4RGW - -
4 PsiBlast_PDB 77.1599% -88 - C11 -4RGW - -
2 PsiBlast_PDB 77.0198% -88 - C11 -5FUR - TAF1_HUMAN -
561 Fugue 68.48100% -95 - C7 -1EQF - -
7 PsiBlast_PDB 68.46100% -95 - C7 -1EQF - -
6 PsiBlast_PDB 66.8499%-104 - C7 -3AAD - -
547 HHSearch 66.65100%-115 - C7 -3UV5 - -
9 PsiBlast_PDB 66.65100%-115 - C7 -3UV5 - -
8 PsiBlast_PDB 64.40100%-123 - C7 -6FIC 7.3
545 HHSearch 53.6631% 46 * C11 *4OY2 - TAF1_YEAST -
546 HHSearch 49.1031% 49 - C11 -4OY2 - TAF1_YEAST -
14 PsiBlast_PDB 48.0299%-144 - C7 -5I1Q 7.7
15 PsiBlast_PDB 47.6399%-134 - C7 -5I29 6.8
12 PsiBlast_PDB 47.2699%-131 - C7 -4YYM - TAF1_HUMAN -
10 PsiBlast_PDB 47.2092%-138 - C7 -6DF4 8.7 ?
11 PsiBlast_PDB 47.1292%-133 - C7 -6DF7 9.0 ?
559 HHSearch 47.0799%-144 - C7 -5I1Q 7.7
22 Blastp_CBE 46.89100%-141 - C7 -6BQD 7.3
21 Blastp_CBE 46.68100%-141 - C7 -3UV4 2.9
560 HHSearch 46.6399%-136 - C7 -5I29 6.8
17 PsiBlast_PDB 46.59100%-150 - C7 -5MG2 8.4
18 PsiBlast_PDB 46.09100%-149 - C7 -6BQD 8.5 TAF1_HUMAN
16 PsiBlast_PDB 45.69100%-134 - C7 -3UV4 2.0 TAF1_HUMAN
20 PsiBlast_PDB 45.6296%-150 - C7 -5IGL 6.6
23 Blastp_CBE 45.1592%-134 - C7 -6DF7 9.0 ?
31 Blastp_CBE 40.7735%-165 - C7 -5MLJ 6.6
33 Blastp_CBE 40.6336%-160 - C7 -6J3P 6.8
32 Blastp_CBE 40.2535%-156 - C7 -5MLJ 6.6 KAT2A_HUMAN
34 Blastp_CBE 39.9836%-154 - C7 -6J3P 6.4 KAT2A_HUMAN
30 Blastp_CBE 39.1833%-135 - C7 -3NXB 2.2 CECR2_HUMAN
29 Blastp_CBE 38.7133%-135 - C7 -3NXB 2.1
27 Blastp_CBE 38.2733%-132 - C7 -5V84 5.5 CECR2_HUMAN
28 Blastp_CBE 38.0733%-127 - C7 -5V84 6.2 CECR2_HUMAN
26 Blastp_CBE 37.7333%-121 - C7 -5V84 5.5 CECR2_HUMAN
25 Blastp_CBE 37.6133%-124 - C7 -5V84 5.9