@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : NEK1_HUMAN: (2020-09-17 )
MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARTCIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIAEEFCLKTFSKFGSQPIPAKRPASGQNSISVMPAQKITKPAAKYGIPLAYKKYGDKKLHEKKPLQKHKQAHQTPEKRVNTGEERRKISEEAARKRRLEFIEKEKKQKDQIISLMKAEQMKRQEKERLERINRAREQGWRNVLSAGGSGEVKAPFLGSGGTIAPSSFSSRGQYEHYHAIFDQMQQQRAEDNEAKWKREIYGRGLPERGILPGVRPGFPYGAAGHHHFPDADDIRKTLKRLKAVSKQANANRQKGQLAVERAKQVEEFLQRKREAMQNKARAEGHMVYLARLRQIRLQNFNERQQIKAKLRGEKKEANHSEGQEGSEEADMRRKKIESLKAHANARAAVLKEQLERKRKEAYEREKKVWEEHLVAKGVKSSDVSPPLGQHETGGSPSKQQMRSVISVTSALKEVGVDSSLTDTRETSEEMQKTNNAISSKREILRRLNENLKAQEDEKGKQNLSDTFEINVHEDAKEHEKEKSVSSDRKKWEAGGQLVIPLDELTLDTSFSTTERHTVGEVIKLGPNGSPRRAWGKSPTDSVLKILGEAELQLQTELLENTTIRSEISPEGEKYKPLITGEKKVQCISHEINPSAIVDSPVETKSPEFSEASPQMSLKLEGNLEEPDDLETEILQEPSGTNKDESLPCTITDVWISEEKETKETQSADRITIQENEVSEDGVSSTVDQLSDIHIEPGTNDSQHSKCDVDKSVQPEPFFHKVVHSEHLNLVPQVQSVQCSPEESFAFRSHSHLPPKNKNKNSLLIGLSTGLFDANNPKMLRTCSLPDLSKLFRTLMDVPTVGDVRQDNLEIDEIEDENIKEGPSDSEDIVFEETDTDLQELQASMEQLLREQPGEEYSEEEESVLKNSDVEPTANGTDVADEDDNPSSESALNEEWHSDNSDGEIASECECDSVFNHLEELRLHLEQEMGFEKFFEVYEKIKAIHEDEDENIEICSKIVQNILGNEHQHLYAKILHLVMADGAYQEDNDE

Atome Classification :

(66 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MOH_B_12(5M0U)
KAPCA_CRIGR
[Raw transfer]



GOL_A_15(2QCS)
KAPCA_MOUSE
[Raw transfer]



GOL_A_4(3ZO1)
KAPCA_BOVIN
[Raw transfer]



8FU_A_2(5XVA)
PAK4_HUMAN
[Raw transfer]



3FE_A_3(4U8Z)
STK24_HUMAN
[Raw transfer]



8FX_A_2(5XVG)

[Raw transfer]



3JA_A_2(4W8D)
STK24_HUMAN
[Raw transfer]



X4Z_A_4(2X4Z)

[Raw transfer]



3JB_A_2(4W8E)
STK24_HUMAN
[Raw transfer]



KS1_A_2(4QMW)
STK24_HUMAN
[Raw transfer]



H1N_A_2(4QMT)
STK24_HUMAN
[Raw transfer]



M77_A_2(5VEF)
?
[Raw transfer]



34L_A_3(4QMO)
STK24_HUMAN
[Raw transfer]



NJD_A_2(4NJD)

[Raw transfer]



0XZ_A_2(4GV1)
AKT1_HUMAN
[Raw transfer]



GOL_A_2(2X4Z)

[Raw transfer]



GOL_A_3(4APP)

[Raw transfer]



STU_A_2(5VED)
PAK4_HUMAN
[Raw transfer]



4T6_A_2(5BMS)

[Raw transfer]



ANP_A_3(1O6K)
AKT2_HUMAN
[Raw transfer]



CQU_A_3(3CQU)
AKT1_HUMAN
[Raw transfer]



ANP_A_3(4JDI)
PAK4_HUMAN
[Raw transfer]



23D_A_2(2CDZ)

[Raw transfer]



XFE_A_4(3MV5)
AKT1_HUMAN
[Raw transfer]



ANP_A_4(4QML)
STK24_HUMAN
[Raw transfer]



ANP_A_5(4EKK)
AKT1_HUMAN
[Raw transfer]



ANP_A_3(1O6L)
AKT2_HUMAN
[Raw transfer]



EDO_A_10(2Q0N)

[Raw transfer]



8FR_A_2(5XVF)

[Raw transfer]



ANP_B_6(4FIF)
PAK4_HUMAN
[Raw transfer]



ATP_B_4(3A7H)
STK24_HUMAN
[Raw transfer]



67U_A_2(5I0B)
PAK4_HUMAN
[Raw transfer]



ANP_B_4(5UPK)
?
[Raw transfer]



EDO_A_5(5ZJW)

[Raw transfer]



EDO_A_4(2J0I)

[Raw transfer]



EDO_D_15(6HXF)
STK10_HUMAN
[Raw transfer]



AF3_E_6(1L3R)
KAPCA_MOUSE
[Raw transfer]



EDO_B_7(6HXF)
STK10_HUMAN
[Raw transfer]



MOH_A_7(5LCR)
KAPCA_CRIGR
[Raw transfer]



8KB_A_2(5N3G)
KAPCA_CRIGR
[Raw transfer]



EDO_D_16(6HXF)
STK10_HUMAN
[Raw transfer]



MOH_A_4(5LCU)
KAPCA_CRIGR
[Raw transfer]



RIP_D_6(6EM7)
KAPCA_CRIGR
[Raw transfer]



RIP_E_6(6ESA)
KAPCA_CRIGR
[Raw transfer]



RIP_C_4(6EMA)
KAPCA_CRIGR
[Raw transfer]



EDO_A_7(2JFL)
SLK_HUMAN
[Raw transfer]



RIP_E_4(5OUC)
KAPCA_CRIGR
[Raw transfer]



RIP_D_5(5OT3)
KAPCA_CRIGR
[Raw transfer]
21 Blastp_CBE 95.0999%-133 - C2 -4B9D - NEK1_HUMAN -
548 HHSearch 94.29100%-130 - C2 -4APC - NEK1_HUMAN -
1 PsiBlast_PDB 93.8599%-134 - C2 -4APC - NEK1_HUMAN -
2 PsiBlast_PDB 93.8499%-136 - C2 -4B9D - NEK1_HUMAN -
547 HHSearch 93.67100%-136 - C2 -4B9D - NEK1_HUMAN -
577 Fugue 64.6625% 7 - C2 -4AW2 - MRCKA_RAT -
20 PsiBlast_PDB 61.8042% -32 - C2 -5M51 - NEK2_HUMAN -
3 PsiBlast_PDB 61.1142% -32 - C2 -2W5A - NEK2_HUMAN -
25 Blastp_CBE 60.7742% -28 - C2 -2W5B - NEK2_HUMAN -
26 Blastp_CBE 60.7542% -47 - C2 -2JAV - NEK2_HUMAN -
242 Blastp_CBE 60.4632% -77 - C2 -6HXF - STK10_HUMAN -
43 Blastp_CBE 60.3732% -44 - C2 -4B6L - PLK3_HUMAN -
75 Blastp_CBE 60.0833% -38 - C2 -2F7X - KAPCA_BOVIN -
44 Blastp_CBE 59.9531% -28 - C2 -4I6H - PLK2_HUMAN -
23 Blastp_CBE 59.9342% -26 - C2 -5M57 - NEK2_HUMAN -
73 Blastp_CBE 59.8633% -38 - C2 -2OH0 - KAPCA_BOVIN -
46 Blastp_CBE 59.7731% -27 - C2 -4I6B - PLK2_HUMAN -
14 PsiBlast_PDB 59.7242% -31 - C2 -2XNM - NEK2_HUMAN -
102 Blastp_CBE 59.7032% -42 - C2 -2UZT - KAPCA_BOVIN -
72 Blastp_CBE 59.5733% -38 - C2 -2OJF - KAPCA_BOVIN -
410 Blastp_CBE 56.2432% -53 - C2 -4QML 5.7 STK24_HUMAN
407 Blastp_CBE 56.1432% -53 - C2 -4QMO 6.2 STK24_HUMAN
425 Blastp_CBE 55.9632% -53 - C2 -4U8Z 6.0 STK24_HUMAN
403 Blastp_CBE 55.8732% -53 - C2 -4QMT 7.7 STK24_HUMAN
400 Blastp_CBE 55.7532% -51 - C2 -4QMW 7.3 STK24_HUMAN
424 Blastp_CBE 55.7132% -54 - C2 -4W8D 5.0 STK24_HUMAN
221 Blastp_CBE 55.6932% -41 - C2 -5LCU 2.8 KAPCA_CRIGR
423 Blastp_CBE 55.5632% -52 - C2 -4W8E 6.4 STK24_HUMAN
440 Blastp_CBE 55.4731% -66 - C2 -5UPK 4.1 ?
490 Blastp_CBE 55.4532% -27 - C2 -4GV1 5.9 AKT1_HUMAN
449 Blastp_CBE 55.0431% -66 - C2 -5BMS 5.3
437 Blastp_CBE 54.8231% -67 - C2 -5ZJW 3.5
392 Blastp_CBE 54.8032% -50 - C2 -3A7H 5.2 STK24_HUMAN
420 Blastp_CBE 54.7531% -64 - C2 -5VEF 3.8 ?
482 Blastp_CBE 54.7332% -29 - C2 -4EKK 5.9 AKT1_HUMAN
455 Blastp_CBE 54.6131% -70 - C2 -4NJD 7.6
438 Blastp_CBE 54.5831% -61 - C2 -5XVG 5.0
446 Blastp_CBE 54.5431% -68 - C2 -4FIF 5.7 PAK4_HUMAN
439 Blastp_CBE 54.5131% -66 - C2 -5XVA 4.4 PAK4_HUMAN
429 Blastp_CBE 54.4931% -66 - C2 -2J0I 3.1
223 Blastp_CBE 54.4532% -38 - C2 -5LCR 2.8 KAPCA_CRIGR
217 Blastp_CBE 54.4232% -34 - C2 -5M0U Error KAPCA_CRIGR
422 Blastp_CBE 54.2731% -66 - C2 -5VED 7.0 PAK4_HUMAN
457 Blastp_CBE 54.2231% -65 - C2 -2X4Z 6.8
454 Blastp_CBE 54.0031% -66 - C2 -5I0B 5.7 PAK4_HUMAN
441 Blastp_CBE 53.7931% -62 - C2 -4JDI 7.3 PAK4_HUMAN
239 Blastp_CBE 53.6032% -61 - C2 -6HXF 3.4 STK10_HUMAN
431 Blastp_CBE 53.4731% -58 - C2 -2Q0N 2.8
477 Blastp_CBE 53.4632% -26 - C2 -3MV5 4.7 AKT1_HUMAN
479 Blastp_CBE 53.3532% -26 - C2 -3CQU 5.0 AKT1_HUMAN
466 Blastp_CBE 53.2431% -65 - C2 -5XVF 5.3
456 Blastp_CBE 52.9131% -60 - C2 -4APP 3.5
430 Blastp_CBE 52.8131% -65 - C2 -2CDZ 5.7
241 Blastp_CBE 51.7832% -49 - C2 -6HXF 3.4 STK10_HUMAN
411 Blastp_CBE 50.6732% -45 - C2 -1O6K 7.0 AKT2_HUMAN
384 Blastp_CBE 50.5032% -42 - C2 -1O6L 6.8 AKT2_HUMAN
266 Blastp_CBE 46.5432% -3 - C2 -2QCS Error KAPCA_MOUSE
245 Blastp_CBE 46.1332% -6 - C2 -1L3R 2.8 KAPCA_MOUSE
318 Blastp_CBE 45.9932% -4 - C2 -6EMA 3.1 KAPCA_CRIGR
252 Blastp_CBE 45.6432% -6 - C2 -3ZO1 Error KAPCA_BOVIN
346 Blastp_CBE 45.5332% -4 - C2 -5N3G 1.1 KAPCA_CRIGR
311 Blastp_CBE 45.2332% -2 - C2 -6ESA 3.2 KAPCA_CRIGR
364 Blastp_CBE 45.1032% -1 - C2 -6EM7 3.2 KAPCA_CRIGR
325 Blastp_CBE 44.6632% -7 - C2 -5OUC 3.3 KAPCA_CRIGR
328 Blastp_CBE 44.1932% -8 - C2 -5OT3 2.9 KAPCA_CRIGR
505 Blastp_CBE 43.1231% -23 - C2 -2JFL 3.3 SLK_HUMAN