@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PDK1_HUMAN: (2020-09-18 )
MRLARLLRGAALAGPGPGLRAAGFSRSFSSDSGSSPASERGVPGQVDFYARFSPSPLSMKQFLDFGSVNACEKTSFMFLRQELPVRLANIMKEISLLPDNLLRTPSVQLVQSWYIQSLQELLDFKDKSAEDAKAIYDFTDTVIRIRNRHNDVIPTMAQGVIEYKESFGVDPVTSQNVQYFLDRFYMSRISIRMLLNQHSLLFGGKGKGSPSHRKHIGSINPNCNVLEVIKDGYENARRLCDLYYINSPELELEELNAKSPGQPIQVVYVPSHLYHMVFELFKNAMRATMEHHANRGVYPPIQVHVTLGNEDLTVKMSDRGGGVPLRKIDRLFNYMYSTAPRPRVETSRAVPLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKALSTDSIERLPVYNKAAWKHYNTNHEADDWCVPSREPKDMTTFRSA

Atome Classification :

(59 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

P35_A_3(5J71)
PDK2_HUMAN
[Raw transfer]




P35_A_3(5J71)
PDK2_HUMAN
[Raw transfer]




P46_A_2(5J6A)
PDK2_HUMAN
[Raw transfer]




7FW_A_2(5M4M)
PDK2_HUMAN
[Raw transfer]




7FE_A_2(5M4P)
PDK2_HUMAN
[Raw transfer]




7F9_A_3(5M4K)
PDK2_HUMAN
[Raw transfer]




7FV_A_2(5M4N)
PDK2_HUMAN
[Raw transfer]




SZ6_A_4(4V25)
PDK2_HUMAN
[Raw transfer]




7TJ_A_5(4V26)
PDK2_HUMAN
[Raw transfer]




P4A_B_4(2ZDX)
PDK4_HUMAN
[Raw transfer]




ADP_A_5(1JM6)
PDK2_RAT
[Raw transfer]




ANP_B_10(3CRL)
PDK2_RAT
[Raw transfer]




P4A_A_3(2ZDX)
PDK4_HUMAN
[Raw transfer]




ANP_B_10(3CRL)
PDK2_RAT
[Raw transfer]




ADP_A_5(1JM6)
PDK2_RAT
[Raw transfer]




ANP_A_9(3CRL)
PDK2_RAT
[Raw transfer]




RDC_A_5(2Q8I)
PDK3_HUMAN
[Raw transfer]




ATP_A_2(2BU2)
PDK2_HUMAN
[Raw transfer]




ANP_B_6(2E0A)
PDK4_HUMAN
[Raw transfer]




ADP_B_6(3D2R)
PDK4_HUMAN
[Raw transfer]




ADP_B_7(2ZDY)
PDK4_HUMAN
[Raw transfer]




ADP_B_6(3D2R)
PDK4_HUMAN
[Raw transfer]




ANP_A_5(2E0A)
PDK4_HUMAN
[Raw transfer]




ADP_A_4(2ZKJ)
PDK4_HUMAN
[Raw transfer]




ADP_B_7(2ZKJ)
PDK4_HUMAN
[Raw transfer]




ANP_A_5(2E0A)
PDK4_HUMAN
[Raw transfer]




ADP_B_6(1JM6)
PDK2_RAT
[Raw transfer]




ADP_A_5(3D2R)
PDK4_HUMAN
[Raw transfer]




ATP_A_7(1Y8P)
PDK3_HUMAN
[Raw transfer]




ADP_A_5(3D2R)
PDK4_HUMAN
[Raw transfer]




ATP_A_7(1Y8P)
PDK3_HUMAN
[Raw transfer]




ADP_A_7(1Y8O)
PDK3_HUMAN
[Raw transfer]




ADP_A_7(1Y8O)
PDK3_HUMAN
[Raw transfer]




ADP_A_4(2ZDY)
PDK4_HUMAN
[Raw transfer]




ADP_A_2(2BU8)
PDK2_HUMAN
[Raw transfer]




ADP_A_2(4H7Q)
BCKD_RAT
[Raw transfer]




ANP_A_5(4E01)
BCKD_RAT
[Raw transfer]




ADP_A_2(4H81)
BCKD_RAT
[Raw transfer]




ADP_A_2(4DZY)
BCKD_RAT
[Raw transfer]




ANP_A_2(4E02)
BCKD_RAT
[Raw transfer]




ADP_A_2(3TZ4)
BCKD_RAT
[Raw transfer]




ADP_A_2(4H85)
BCKD_RAT
[Raw transfer]




ADP_A_2(4E00)
BCKD_RAT
[Raw transfer]




ADP_A_2(3TZ5)
BCKD_RAT
[Raw transfer]




ANP_A_2(4E02)
BCKD_RAT
[Raw transfer]




ADP_A_6(1GKZ)
BCKD_RAT
[Raw transfer]




SAP_A_9(1GJV)
BCKD_RAT
[Raw transfer]




ADP_A_2(3VAD)
BCKD_RAT
[Raw transfer]




ADP_A_6(1GKZ)
BCKD_RAT
[Raw transfer]




TLA_A_3(4MPE)
PDK2_HUMAN
[Raw transfer]




TLA_A_3(4MP7)
PDK2_HUMAN
[Raw transfer]




TLA_A_2(4MPC)
PDK2_HUMAN
[Raw transfer]




TLA_A_3(4MPN)
PDK2_HUMAN
[Raw transfer]




TLA_A_3(4MP2)
PDK2_HUMAN
[Raw transfer]




3 PsiBlast_PDB 96.47100%-126 - C7 -2Q8H - PDK1_HUMAN -
2 PsiBlast_PDB 95.67100%-121 - C7 -2Q8G - PDK1_HUMAN -
1 PsiBlast_PDB 95.30100%-120 - C7 -2Q8F - PDK1_HUMAN -
23 Blastp_CBE 89.5669%-125 - C7 -3CRL 5.6 PDK2_RAT
111 HHSearch 88.8597% -67 - C7 -2Q8F - PDK1_HUMAN -
114 HHSearch 88.7997% -66 - C7 -2Q8G - PDK1_HUMAN -
24 Blastp_CBE 88.2669%-122 - C7 -3CRL 5.6 PDK2_RAT
37 Blastp_CBE 86.7867%-117 - C7 -3D2R 7.9 PDK4_HUMAN
17 PsiBlast_PDB 86.0769%-124 - C7 -2BU8 4.6 PDK2_HUMAN
39 Blastp_CBE 85.6867%-119 - C7 -2ZKJ 8.0 PDK4_HUMAN
34 Blastp_CBE 85.6869% -83 - C7 -1Y8P 8.0 PDK3_HUMAN
46 Blastp_CBE 85.3968%-117 - C7 -2E0A 9.1 PDK4_HUMAN
41 Blastp_CBE 85.1668%-126 - C7 -2ZDY 5.9 PDK4_HUMAN
5 PsiBlast_PDB 84.8869%-115 - C7 -4MP7 3.6 PDK2_HUMAN
38 Blastp_CBE 84.8767%-130 - C7 -3D2R 7.6 PDK4_HUMAN
45 Blastp_CBE 84.7468%-121 - C7 -2E0A 8.4 PDK4_HUMAN
4 PsiBlast_PDB 84.6869%-115 - C7 -4MP2 3.7 PDK2_HUMAN
8 PsiBlast_PDB 84.6769%-115 - C7 -4MPN 2.4 PDK2_HUMAN
7 PsiBlast_PDB 84.5169%-112 - C7 -4MPE 3.6 PDK2_HUMAN
6 PsiBlast_PDB 84.3069%-114 - C7 -4MPC 3.8 PDK2_HUMAN
40 Blastp_CBE 84.2767%-128 - C7 -2ZKJ 7.6 PDK4_HUMAN
13 PsiBlast_PDB 84.1769%-123 - C7 -2BU2 5.7 PDK2_HUMAN
42 Blastp_CBE 84.1268%-111 - C7 -2ZDY 7.0 PDK4_HUMAN
35 Blastp_CBE 83.8369% -83 - C7 -1Y8O 5.1 PDK3_HUMAN
11 PsiBlast_PDB 83.7269%-124 - C7 -4V26 7.5 PDK2_HUMAN
21 Blastp_CBE 83.6170%-123 - C7 -5M4P 5.2 PDK2_HUMAN
20 PsiBlast_PDB 83.4069%-125 - C7 -5M4M 4.2 PDK2_HUMAN
44 Blastp_CBE 83.3168%-128 - C7 -2ZDX 4.5 PDK4_HUMAN
29 Blastp_CBE 82.9869% -83 - C7 -2Q8I 5.8 PDK3_HUMAN
132 Fugue 82.8071%-126 - C7 -1JM6 6.4 PDK2_RAT
27 Blastp_CBE 82.5869%-127 - C7 -1JM6 6.6 PDK2_RAT
9 PsiBlast_PDB 82.5569%-124 - C7 -5J6A 4.8 PDK2_HUMAN
18 PsiBlast_PDB 82.4469%-121 - C7 -4V25 6.5 PDK2_HUMAN
19 PsiBlast_PDB 82.3269%-127 - C7 -5M4K 4.1 PDK2_HUMAN
116 HHSearch 82.2769% -55 - C7 -3CRL 5.6 PDK2_RAT
28 Blastp_CBE 82.1969%-127 - C7 -1JM6 6.4 PDK2_RAT
43 Blastp_CBE 81.8768%-120 - C7 -2ZDX 4.8 PDK4_HUMAN
117 HHSearch 81.7069%-121 - C7 -5J71 4.8 PDK2_HUMAN
10 PsiBlast_PDB 81.4269%-122 - C7 -5J71 4.8 PDK2_HUMAN
112 HHSearch 81.3766% -46 - C7 -1Y8P 8.0 PDK3_HUMAN
22 Blastp_CBE 81.2070%-124 - C7 -5M4N 6.0 PDK2_HUMAN
115 HHSearch 79.2466% -43 - C7 -1Y8O 5.1 PDK3_HUMAN
122 HHSearch 76.6365% -41 - C7 -3D2R 7.9 PDK4_HUMAN
118 HHSearch 75.9267% -35 - C7 -2E0A 9.1 PDK4_HUMAN
123 HHSearch 72.5564% -25 - C7 -3D2R 7.6 PDK4_HUMAN
54 Blastp_CBE 52.9933% -27 - C7 -4E01 6.8 BCKD_RAT
58 Blastp_CBE 52.8033% -25 - C7 -3TZ4 5.6 BCKD_RAT
56 Blastp_CBE 52.7233% -27 - C7 -4DZY 6.0 BCKD_RAT
50 Blastp_CBE 52.5133% -26 - C7 -4H85 5.9 BCKD_RAT
47 Blastp_CBE 52.3133% -19 - C7 -1GKZ 4.6 BCKD_RAT
61 Blastp_CBE 52.2433% -27 - C7 -3VAD 5.9 BCKD_RAT
51 Blastp_CBE 52.1533% -34 - C7 -4H81 5.9 BCKD_RAT
55 Blastp_CBE 52.0133% -29 - C7 -4E00 5.5 BCKD_RAT
57 Blastp_CBE 51.8633% -25 - C7 -3TZ5 6.6 BCKD_RAT
53 Blastp_CBE 51.7333% -24 - C7 -4E02 6.6 BCKD_RAT
52 Blastp_CBE 51.7133% -26 - C7 -4H7Q 5.4 BCKD_RAT
49 Blastp_CBE 51.5533% -25 - C7 -1GJV 5.4 BCKD_RAT
120 HHSearch 50.7330% 12 - C7 -4E02 6.5 BCKD_RAT
133 Fugue 49.5633% 22 * C7 *1GKZ 4.5 BCKD_RAT