@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PDK4_HUMAN: (2020-09-18 )
MKAARFVLRSAGSLNGAGLVPREVEHFSRYSPSPLSMKQLLDFGSENACERTSFAFLRQELPVRLANILKEIDILPTQLVNTSSVQLVKSWYIQSLMDLVEFHEKSPDDQKALSDFVDTLIKVRNRHHNVVPTMAQGIIEYKDACTVDPVTNQNLQYFLDRFYMNRISTRMLMNQHILIFSDSQTGNPSHIGSIDPNCDVVAVVQDAFECSRMLCDQYYLSSPELKLTQVNGKFPDQPIHIVYVPSHLHHMLFELFKNAMRATVEHQENQPSLTPIEVIVVLGKEDLTIKISDRGGGVPLRIIDRLFSYTYSTAPTPVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSLSGYGTDAIIYLKALSSESIEKLPVFNKSAFKHYQMSSEADDWCIPSREPKNLAKEVAM

Atome Classification :

(54 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

P35_A_3(5J71)
PDK2_HUMAN
[Raw transfer]




7FW_A_2(5M4M)
PDK2_HUMAN
[Raw transfer]




PFT_A_2(4MP7)
PDK2_HUMAN
[Raw transfer]




PV2_A_3(4MPC)
PDK2_HUMAN
[Raw transfer]




PV0_A_2(4MPN)
PDK2_HUMAN
[Raw transfer]




PV8_A_2(4MPE)
PDK2_HUMAN
[Raw transfer]




P35_A_3(5J71)
PDK2_HUMAN
[Raw transfer]




7F9_A_3(5M4K)
PDK2_HUMAN
[Raw transfer]




P46_A_2(5J6A)
PDK2_HUMAN
[Raw transfer]




7FV_A_2(5M4N)
PDK2_HUMAN
[Raw transfer]




SZ6_A_4(4V25)
PDK2_HUMAN
[Raw transfer]




7FE_A_2(5M4P)
PDK2_HUMAN
[Raw transfer]




PV1_A_2(4MP2)
PDK2_HUMAN
[Raw transfer]




7TJ_A_5(4V26)
PDK2_HUMAN
[Raw transfer]




P4A_B_4(2ZDX)
PDK4_HUMAN
[Raw transfer]




P4A_A_3(2ZDX)
PDK4_HUMAN
[Raw transfer]




RDC_A_5(2Q8I)
PDK3_HUMAN
[Raw transfer]




ADP_A_4(2ZKJ)
PDK4_HUMAN
[Raw transfer]




ADP_B_7(2ZKJ)
PDK4_HUMAN
[Raw transfer]




ANP_B_6(2E0A)
PDK4_HUMAN
[Raw transfer]




ANP_A_5(2E0A)
PDK4_HUMAN
[Raw transfer]




ADP_B_6(3D2R)
PDK4_HUMAN
[Raw transfer]




ADP_B_6(3D2R)
PDK4_HUMAN
[Raw transfer]




ANP_A_5(2E0A)
PDK4_HUMAN
[Raw transfer]




ADP_A_5(3D2R)
PDK4_HUMAN
[Raw transfer]




ADP_A_5(1JM6)
PDK2_RAT
[Raw transfer]




ADP_A_5(1JM6)
PDK2_RAT
[Raw transfer]




ADP_A_5(3D2R)
PDK4_HUMAN
[Raw transfer]




ANP_A_9(3CRL)
PDK2_RAT
[Raw transfer]




ADP_B_7(2ZDY)
PDK4_HUMAN
[Raw transfer]




ANP_B_10(3CRL)
PDK2_RAT
[Raw transfer]




ANP_B_10(3CRL)
PDK2_RAT
[Raw transfer]




ATP_A_2(2BU2)
PDK2_HUMAN
[Raw transfer]




ADP_A_4(2ZDY)
PDK4_HUMAN
[Raw transfer]




ADP_A_7(1Y8O)
PDK3_HUMAN
[Raw transfer]




ATP_A_7(1Y8P)
PDK3_HUMAN
[Raw transfer]




ADP_B_6(1JM6)
PDK2_RAT
[Raw transfer]




ATP_A_7(1Y8P)
PDK3_HUMAN
[Raw transfer]




ADP_A_7(1Y8O)
PDK3_HUMAN
[Raw transfer]




ADP_A_2(4DZY)
BCKD_RAT
[Raw transfer]




ANP_A_5(4E01)
BCKD_RAT
[Raw transfer]




ADP_A_2(2BU8)
PDK2_HUMAN
[Raw transfer]




ADP_A_2(3TZ4)
BCKD_RAT
[Raw transfer]




ADP_A_2(4E00)
BCKD_RAT
[Raw transfer]




ANP_A_2(4E02)
BCKD_RAT
[Raw transfer]




ADP_A_2(3TZ5)
BCKD_RAT
[Raw transfer]




ADP_A_2(4H7Q)
BCKD_RAT
[Raw transfer]




ADP_A_2(4H85)
BCKD_RAT
[Raw transfer]




ADP_A_6(1GKZ)
BCKD_RAT
[Raw transfer]




ADP_A_2(4H81)
BCKD_RAT
[Raw transfer]




24 Blastp_CBE 92.69100%-121 - C8 -3D2R 7.9 PDK4_HUMAN
25 Blastp_CBE 91.17100%-122 - C8 -2ZKJ 8.0 PDK4_HUMAN
1 PsiBlast_PDB 90.7599%-120 - C8 -2E0A 9.1 PDK4_HUMAN
21 Blastp_CBE 90.6999%-130 - C8 -2ZDY 5.9 PDK4_HUMAN
4 PsiBlast_PDB 90.67100%-131 - C8 -2ZKJ 7.6 PDK4_HUMAN
5 PsiBlast_PDB 90.01100%-131 - C8 -3D2R 7.6 PDK4_HUMAN
23 Blastp_CBE 89.6399%-126 - C8 -2E0A 8.4 PDK4_HUMAN
3 PsiBlast_PDB 89.3999%-114 - C8 -2ZDY 7.0 PDK4_HUMAN
2 PsiBlast_PDB 88.0199%-132 - C8 -2ZDX 4.5 PDK4_HUMAN
22 Blastp_CBE 87.3299%-124 - C8 -2ZDX 4.8 PDK4_HUMAN
10 PsiBlast_PDB 83.2965%-127 - C8 -3CRK - PDK2_RAT -
123 HHSearch 82.9696% -36 - C8 -3D2R 7.9 PDK4_HUMAN
36 Blastp_CBE 81.8366%-128 - C8 -2BU2 5.7 PDK2_HUMAN
33 Blastp_CBE 81.3866%-124 - C8 -2BU7 - PDK2_HUMAN -
35 Blastp_CBE 81.1966%-125 - C8 -2BU5 - PDK2_HUMAN -
34 Blastp_CBE 81.1066%-126 - C8 -2BU6 - PDK2_HUMAN -
124 HHSearch 80.9696% -48 - C8 -3D2R 7.6 PDK4_HUMAN
121 HHSearch 80.9696% -33 - C8 -2E0A 9.1 PDK4_HUMAN
29 Blastp_CBE 80.3366%-127 - C8 -5J71 4.8 PDK2_HUMAN
26 Blastp_CBE 79.9265% -62 - C8 -3CRL 5.6 PDK2_RAT
43 Blastp_CBE 79.9063% -60 - C8 -1Y8P 8.0 PDK3_HUMAN
28 Blastp_CBE 79.6265%-131 - C8 -1JM6 6.6 PDK2_RAT
16 PsiBlast_PDB 79.4565%-128 - C8 -5M4P 8.0 PDK2_HUMAN
120 HHSearch 79.4265% -59 - C8 -3CRL 5.6 PDK2_RAT
11 PsiBlast_PDB 79.4265% -64 - C8 -3CRL 5.6 PDK2_RAT
30 Blastp_CBE 79.2666%-131 - C8 -5J6A 5.6 PDK2_HUMAN
14 PsiBlast_PDB 79.1865%-129 - C8 -5M4M 4.9 PDK2_HUMAN
99 Fugue 79.1067%-131 - C8 -1JM6 6.4 PDK2_RAT
9 PsiBlast_PDB 79.0365%-133 - C8 -1JM6 6.4 PDK2_RAT
37 Blastp_CBE 79.0167%-128 - C8 -4V26 7.5 PDK2_HUMAN
12 PsiBlast_PDB 78.9065%-127 - C8 -4V25 6.4 PDK2_HUMAN
115 HHSearch 78.1063% -42 - C8 -1Y8P 8.0 PDK3_HUMAN
13 PsiBlast_PDB 77.8465%-132 - C8 -5M4K 4.1 PDK2_HUMAN
15 PsiBlast_PDB 77.6765%-129 - C8 -5M4N 6.1 PDK2_HUMAN
44 Blastp_CBE 77.3263% -61 - C8 -1Y8O 5.1 PDK3_HUMAN
18 PsiBlast_PDB 77.3166% -60 - C8 -4MP7 4.4 PDK2_HUMAN
32 Blastp_CBE 77.0166% -60 - C8 -2BU8 4.6 PDK2_HUMAN
17 PsiBlast_PDB 77.0166% -58 - C8 -4MP2 3.7 PDK2_HUMAN
38 Blastp_CBE 76.9363% -66 - C8 -2Q8I 5.8 PDK3_HUMAN
19 PsiBlast_PDB 76.4766% -59 - C8 -4MPC 3.6 PDK2_HUMAN
31 Blastp_CBE 76.3966% -58 - C8 -4MPN 4.0 PDK2_HUMAN
20 PsiBlast_PDB 76.2666% -58 - C8 -4MPE 4.2 PDK2_HUMAN
117 HHSearch 75.2763% -42 - C8 -1Y8O 5.1 PDK3_HUMAN
122 HHSearch 67.1061% -40 - C8 -5J71 4.8 PDK2_HUMAN
50 Blastp_CBE 59.8031%-108 - C8 -4E01 6.7 BCKD_RAT
52 Blastp_CBE 59.6331%-107 - C8 -4DZY 6.0 BCKD_RAT
49 Blastp_CBE 59.5931%-106 - C8 -4E02 6.6 BCKD_RAT
46 Blastp_CBE 59.2031%-107 - C8 -4H85 6.0 BCKD_RAT
48 Blastp_CBE 59.1931%-105 - C8 -4H7Q 5.5 BCKD_RAT
51 Blastp_CBE 59.1331%-110 - C8 -4E00 5.3 BCKD_RAT
54 Blastp_CBE 59.1031%-107 - C8 -3TZ4 5.6 BCKD_RAT
47 Blastp_CBE 58.8631%-107 - C8 -4H81 5.7 BCKD_RAT
53 Blastp_CBE 58.7631%-107 - C8 -3TZ5 6.4 BCKD_RAT
100 Fugue 48.9530% 16 - C8 -1GKZ 4.5 BCKD_RAT