@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : TOPK_HUMAN: (2020-09-23 )
MEGISNFKTPSKLSEKKKSVLCSTPTINIPASPFMQKLGFGTGVNVYLMKRSPRGLSHSPWAVKKINPICNDHYRSVYQKRLMDEAKILKSLHHPNIVGYRAFTEANDGSLCLAMEYGGEKSLNDLIEERYKASQDPFPAAIILKVALNMARGLKYLHQEKKLLHGDIKSSNVVIKGDFETIKICDVGVSLPLDENMTVTDPEACYIGTEPWKPKEAVEENGVITDKADIFAFGLTLWEMMTLSIPHINLSNDDDDEDKTFDESDFDDEAYYAALGTRPPINMEELDESYQKVIELFSVCTNEDPKDRPSAAHIVEALETDV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_5(2WEL)
KCC2D_HUMAN
[Raw transfer]



HC4_A_9(5J0A)
TOPK_HUMAN
[Raw transfer]



HC4_A_9(5J0A)
TOPK_HUMAN
[Raw transfer]
1 PsiBlast_PDB 92.5999% -86 - C1 -5J0A - ? -
21 Blastp_CBE 89.9199% -88 - C1 -5J0A 3.1 TOPK_HUMAN
51 HHSearch 89.77100% -88 - C1 -5J0A 3.1 TOPK_HUMAN
62 HHSearch 58.8323% -94 - C1 -4G3F - -
70 HHSearch 58.3625% -82 - C1 -4YFI - TNI3K_HUMAN -
68 HHSearch 58.3422% -71 - C1 -4HZS - ACK1_HUMAN -
65 HHSearch 56.6821% -75 - C1 -2QOC - -
60 HHSearch 55.4618% -64 - C1 -3C0I - CSKP_HUMAN -
59 HHSearch 54.6518% -64 - C1 -3C0G - CSKP_HUMAN -
53 HHSearch 53.4722% -24 * C1 *5WNL - RIPK4_MOUSE -
69 HHSearch 53.4119% -45 - C1 -2WEL 3.3 KCC2D_HUMAN
39 Fugue 53.0221% 3 - C1 -4DN5 - M3K14_HUMAN -
54 HHSearch 52.5322% -27 - C1 -5WNJ - RIPK4_MOUSE -
55 HHSearch 51.7322% -25 - C1 -5WNI - RIPK4_MOUSE -
63 HHSearch 51.6022% -2 - C1 -5TE0 - AAK1_HUMAN -
58 HHSearch 51.3623% -38 - C1 -6MYN - -
45 Fugue 51.3515% -38 - C1 -1TKI - TITIN_HUMAN -
67 HHSearch 49.8118% -1 - C1 -2Y7J - PHKG2_HUMAN -
64 HHSearch 49.6516% -66 - C1 -1TKI - TITIN_HUMAN -
46 Fugue 46.8017% 5 - C1 -1KOB - ? -