@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : VRK1_HUMAN: (2021-07-05 )
MPRVKAAQAGRQSSAKRHLAEQFAVGEIITDMAKKEWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPEKNKPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDLSVVENGGLKAKTITKKRKKEIEESKEPGVEDTEWSNTQTEEAIQTRSRTRKRVQK

Atome Classification :

(51 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

E5M_B_7(6BRU)
VRK1_HUMAN
[Raw transfer]



E5M_D_13(6BRU)
VRK1_HUMAN
[Raw transfer]



E8V_D_16(6BU6)
VRK1_HUMAN
[Raw transfer]



F87_B_10(6CNX)
VRK1_HUMAN
[Raw transfer]



EA7_D_15(6CFM)
VRK1_HUMAN
[Raw transfer]



7DZ_C_11(5UVF)
VRK1_HUMAN
[Raw transfer]



G6J_D_25(6DD4)
VRK1_HUMAN
[Raw transfer]



E1D_B_10(6BP0)
VRK1_HUMAN
[Raw transfer]



F7D_B_7(6CMM)
VRK1_HUMAN
[Raw transfer]



G6J_B_13(6DD4)
VRK1_HUMAN
[Raw transfer]



E8D_B_11(6BTW)
VRK1_HUMAN
[Raw transfer]



KWJ_C_18(6NPN)
VRK1_HUMAN
[Raw transfer]



7DZ_D_19(5UVF)
VRK1_HUMAN
[Raw transfer]



KWJ_A_5(6NPN)
VRK1_HUMAN
[Raw transfer]



7DZ_A_5(5UVF)
VRK1_HUMAN
[Raw transfer]



E8D_A_7(6BTW)
VRK1_HUMAN
[Raw transfer]



F8Y_B_10(6CQH)
VRK1_HUMAN
[Raw transfer]



F87_A_5(6CNX)
VRK1_HUMAN
[Raw transfer]



EA7_B_10(6CFM)
VRK1_HUMAN
[Raw transfer]



EA7_A_6(6CFM)
VRK1_HUMAN
[Raw transfer]



E8V_A_5(6BU6)
VRK1_HUMAN
[Raw transfer]



E8D_D_19(6BTW)
VRK1_HUMAN
[Raw transfer]



E1D_D_20(6BP0)
VRK1_HUMAN
[Raw transfer]



7DZ_A_5(5UVF)
VRK1_HUMAN
[Raw transfer]



F7D_D_17(6CMM)
VRK1_HUMAN
[Raw transfer]



FCS_C_15(6CNX)
VRK1_HUMAN
[Raw transfer]



F8Y_D_19(6CQH)
VRK1_HUMAN
[Raw transfer]



F8Y_A_5(6CQH)
VRK1_HUMAN
[Raw transfer]



KJD_B_5(6NCG)
VRK2_HUMAN
[Raw transfer]



KWJ_B_8(6NPN)
VRK1_HUMAN
[Raw transfer]



KWJ_D_25(6NPN)
VRK1_HUMAN
[Raw transfer]



KJD_A_3(6NCG)
VRK2_HUMAN
[Raw transfer]



REB_B_8(3OP5)
VRK1_HUMAN
[Raw transfer]



8E1_C_14(5UKF)
VRK1_HUMAN
[Raw transfer]



7DZ_A_2(5UU1)
VRK2_HUMAN
[Raw transfer]



REB_C_11(3OP5)
VRK1_HUMAN
[Raw transfer]



REB_A_5(3OP5)
VRK1_HUMAN
[Raw transfer]



8E1_A_5(5UKF)
VRK1_HUMAN
[Raw transfer]



REB_D_15(3OP5)
VRK1_HUMAN
[Raw transfer]



7DZ_B_9(5UVF)
VRK1_HUMAN
[Raw transfer]



7DZ_A_2(5UU1)
VRK2_HUMAN
[Raw transfer]



8E1_D_19(5UKF)
VRK1_HUMAN
[Raw transfer]



8E1_B_8(5UKF)
VRK1_HUMAN
[Raw transfer]



ANP_A_5(6AC9)
VRK1_HUMAN
[Raw transfer]
144 HHSearch 92.15100%-102 - C3 -2RSV - VRK1_HUMAN -
1 PsiBlast_PDB 92.00100%-102 - C3 -2RSV - VRK1_HUMAN -
2 PsiBlast_PDB 83.23100% -76 - C3 -2LAV - VRK1_HUMAN -
3 PsiBlast_PDB 80.11100% -67 - C3 -2KTY - VRK1_HUMAN -
4 PsiBlast_PDB 79.33100% -52 - C3 -2KUL - VRK1_HUMAN -
11 PsiBlast_PDB 79.2296% -90 - C3 -6BU6 6.8 VRK1_HUMAN
39 Blastp_CBE 78.8097% -94 - C3 -6CMM 8.7 VRK1_HUMAN
33 Blastp_CBE 78.8097% -95 - C3 -6CQH 8.2 VRK1_HUMAN
45 Blastp_CBE 78.6997% -91 - C3 -6BU6 9.8 VRK1_HUMAN
15 PsiBlast_PDB 78.6296% -90 - C3 -6CNX 8.9 VRK1_HUMAN
31 Blastp_CBE 78.5597% -88 - C3 -6CSW - VRK1_HUMAN -
59 Blastp_CBE 78.4897% -89 - C3 -5UVF 6.3 VRK1_HUMAN
64 Blastp_CBE 78.4497% -87 - C3 -5UKF 5.6 VRK1_HUMAN
18 PsiBlast_PDB 78.1996% -90 - C3 -6NPN 7.6 VRK1_HUMAN
37 Blastp_CBE 78.1497% -95 - C3 -6CNX 7.7 VRK1_HUMAN
6 PsiBlast_PDB 78.1396% -86 - C3 -3OP5 7.0 VRK1_HUMAN
19 PsiBlast_PDB 78.1096% -87 - C3 -5UKF 6.7 VRK1_HUMAN
54 Blastp_CBE 78.0597% -94 - C3 -6BP0 7.9 VRK1_HUMAN
35 Blastp_CBE 77.9997% -92 - C3 -6CQH 8.0 VRK1_HUMAN
145 HHSearch 77.7897% -93 - C3 -6BU6 - VRK1_HUMAN -
24 Blastp_CBE 77.7897% -96 - C3 -6NPN 7.6 VRK1_HUMAN
62 Blastp_CBE 77.7097% -84 - C3 -3OP5 5.5 VRK1_HUMAN
146 HHSearch 77.6897% -88 - C3 -5UVF 6.8 VRK1_HUMAN
27 Blastp_CBE 77.6697% -90 - C3 -6DD4 8.5 VRK1_HUMAN
56 Blastp_CBE 77.5397%-102 - C3 -6BP0 7.7 VRK1_HUMAN
48 Blastp_CBE 77.5397% -95 - C3 -6BTW 7.6 VRK1_HUMAN
42 Blastp_CBE 77.5197% -93 - C3 -6CFM 7.3 VRK1_HUMAN
14 PsiBlast_PDB 77.4996% -93 - C3 -6CQH 8.0 VRK1_HUMAN
38 Blastp_CBE 77.3897% -94 - C3 -6CNX 8.3 VRK1_HUMAN
10 PsiBlast_PDB 77.3696% -88 - C3 -6BTW 7.1 VRK1_HUMAN
12 PsiBlast_PDB 77.3396% -93 - C3 -6CFM 7.0 VRK1_HUMAN
7 PsiBlast_PDB 77.2996% -88 - C3 -5UVF 6.8 VRK1_HUMAN
51 Blastp_CBE 77.2597% -98 - C3 -6BRU 7.1 VRK1_HUMAN
29 Blastp_CBE 77.2197% -91 - C3 -6DD4 8.1 VRK1_HUMAN
5 PsiBlast_PDB 76.8596% -89 - C3 -6AC9 3.5 VRK1_HUMAN
25 Blastp_CBE 76.8397% -85 - C3 -6NPN 6.5 VRK1_HUMAN
61 Blastp_CBE 76.3897% -97 * C3 *3OP5 6.4 VRK1_HUMAN
53 Blastp_CBE 76.2797% -99 - C3 -6BRU 7.1 VRK1_HUMAN
50 Blastp_CBE 76.0597%-103 - C3 -6BTW 7.3 VRK1_HUMAN
41 Blastp_CBE 75.9197% -98 - C3 -6CMM 8.1 VRK1_HUMAN
44 Blastp_CBE 75.5197%-102 - C3 -6CFM 5.6 VRK1_HUMAN
60 Blastp_CBE 75.3797% -93 - C3 -3OP5 5.7 VRK1_HUMAN
58 Blastp_CBE 75.0897% -92 - C3 -5UVF 7.2 VRK1_HUMAN
57 Blastp_CBE 75.0497% -96 - C3 -5UVF 7.1 VRK1_HUMAN
26 Blastp_CBE 74.8997% -95 - C3 -6NPN 6.5 VRK1_HUMAN
63 Blastp_CBE 67.8797% -95 - C3 -5UKF 4.5 VRK1_HUMAN
65 Blastp_CBE 67.8197% -87 - C3 -5UKF 4.5 VRK1_HUMAN
68 Blastp_CBE 60.4357% -30 - C3 -5UU1 7.3 VRK2_HUMAN
67 Blastp_CBE 59.5857% -31 - C3 -6NCG 5.2 VRK2_HUMAN
153 HHSearch 57.5554% -8 - C3 -5UU1 6.7 VRK2_HUMAN
66 Blastp_CBE 55.5257% -29 - C3 -6NCG 5.7 VRK2_HUMAN