@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR1H2_LXRb: (2021-05-27 )
MSSPTTSSLDTPLPGNGPPQPGAPSSSPTVKEEGPEPWPGGPDPDVPGTDEASSACSTDWVIPDPEEEPERKRKKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGGARRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKKIRKQQQQESQSQSQSPVGPQGSSSSASGPGASPGGSEAGSQGSGEGEGVQLTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE

Atome Classification :

(56 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

67S_E_6(5I4V)
NCOA2_HUMAN
[Raw transfer]



67S_A_5(5I4V)
NCOA2_HUMAN
[Raw transfer]



444_H_8(1PQC)
NR1H2_HUMAN
[Raw transfer]



44B_H_8(1PQ9)
NR1H2_HUMAN
[Raw transfer]



6Y4_E_6(5KYA)
NR1H2_HUMAN
[Raw transfer]



CO1_E_5(1P8D)
NR1H2_HUMAN
[Raw transfer]



KVB_A_2(6S4T)
NR1H2_HUMAN
[Raw transfer]



6Y4_A_5(5KYA)
NR1H2_HUMAN
[Raw transfer]



CO1_F_6(1P8D)
NR1H2_HUMAN
[Raw transfer]



965_B_6(1PQ6)
NR1H2_HUMAN
[Raw transfer]



668_B_5(5HJP)
NR1H2_HUMAN
[Raw transfer]



D3R_A_5(6K9G)
NR1H2_HUMAN
[Raw transfer]



KWE_A_2(6S5K)
NR1H2_HUMAN
[Raw transfer]



965_D_7(1PQ6)
NR1H2_HUMAN
[Raw transfer]



G58_A_3(3L0E)
NR1H2_HUMAN
[Raw transfer]



668_D_8(5HJP)
NR1H2_HUMAN
[Raw transfer]



KVK_C_6(6S4U)
NR1H2_HUMAN
[Raw transfer]



KVK_A_4(6S4U)
NR1H2_HUMAN
[Raw transfer]



KVK_B_5(6S4U)
NR1H2_HUMAN
[Raw transfer]



KUW_C_12(6S4N)
NR1H2_HUMAN
[Raw transfer]



61X_B_6(3KFC)
NR1H2_HUMAN
[Raw transfer]



D3R_C_7(6K9G)
NR1H2_HUMAN
[Raw transfer]



KUW_D_5(6S4N)
NR1H2_HUMAN
[Raw transfer]



61X_D_7(3KFC)
NR1H2_HUMAN
[Raw transfer]



KUW_B_10(6S4N)
NR1H2_HUMAN
[Raw transfer]



6Y8_E_6(5KYJ)
NR1H2_HUMAN
[Raw transfer]



652_B_7(4RAK)
NR1H2_HUMAN
[Raw transfer]



6Y8_A_5(5KYJ)
NR1H2_HUMAN
[Raw transfer]



6OX_D_9(5JY3)
NR1H2_HUMAN
[Raw transfer]



D3R_D_8(6K9G)
NR1H2_HUMAN
[Raw transfer]



D43_D_8(6K9M)
NR1H2_HUMAN
[Raw transfer]



6OX_B_6(5JY3)
NR1H2_HUMAN
[Raw transfer]



KUW_A_8(6S4N)
NR1H2_HUMAN
[Raw transfer]



D43_A_5(6K9M)
NR1H2_HUMAN
[Raw transfer]



0KS_A_5(4DK7)
NR1H2_HUMAN
[Raw transfer]



6OX_C_8(5JY3)
NR1H2_HUMAN
[Raw transfer]



D43_C_7(6K9M)
NR1H2_HUMAN
[Raw transfer]



0KS_C_12(4DK7)
NR1H2_HUMAN
[Raw transfer]



D3R_B_6(6K9G)
NR1H2_HUMAN
[Raw transfer]



D43_B_6(6K9M)
NR1H2_HUMAN
[Raw transfer]



D40_A_3(6K9H)
NR1H2_HUMAN
[Raw transfer]



6OX_A_5(5JY3)
NR1H2_HUMAN
[Raw transfer]



D40_B_4(6K9H)
NR1H2_HUMAN
[Raw transfer]



BQ3_A_5(6JIO)
NR1H2_HUMAN
[Raw transfer]



BQ3_D_6(6JIO)
NR1H2_HUMAN
[Raw transfer]



0KT_C_11(4DK8)
NR1H2_HUMAN
[Raw transfer]



0KT_A_5(4DK8)
NR1H2_HUMAN
[Raw transfer]



444_G_7(1PQC)
NR1H2_HUMAN
[Raw transfer]



44B_L_12(1PQ9)
NR1H2_HUMAN
[Raw transfer]



444_F_6(1PQC)
NR1H2_HUMAN
[Raw transfer]



44B_J_10(1PQ9)
NR1H2_HUMAN
[Raw transfer]



BU1_A_3(4RAK)
NR1H2_HUMAN
[Raw transfer]



IPA_A_8(1PQ6)
NR1H2_HUMAN
[Raw transfer]
21 Blastp_CBE 79.94100%-104 - C1 -4NQA - NR1H2_HUMAN -
1 PsiBlast_PDB 78.34100%-115 - C1 -4NQA - NR1H2_HUMAN (first) -
38 Blastp_CBE 43.48100%-137 - C1 -6S4U 7.0 NR1H2_HUMAN
19 PsiBlast_PDB 42.7297%-132 - C1 -3L0E 10.4 NR1H2_HUMAN
20 PsiBlast_PDB 42.4198%-137 - C1 -5HJP 10.3 NR1H2_HUMAN
15 PsiBlast_PDB 41.2397%-128 - C1 -5I4V 9.0 NCOA2_HUMAN (first)
31 Blastp_CBE 41.17100%-128 - C1 -1PQ6 12.6 NR1H2_HUMAN
13 PsiBlast_PDB 41.01100%-133 - C1 -6S4U 8.3 NR1H2_HUMAN
12 PsiBlast_PDB 40.50100%-130 - C1 -6S4T 12.3 NR1H2_HUMAN
41 Blastp_CBE 40.06100%-135 - C1 -6S4N 10.4 NR1H2_HUMAN
45 Blastp_CBE 39.7397%-125 - C1 -5KYA 9.4 NR1H2_HUMAN
4 PsiBlast_PDB 38.33100%-136 - C1 -1PQ6 2.1 NR1H2_HUMAN
30 Blastp_CBE 37.89100%-149 - C1 -1PQ6 11.9 NR1H2_HUMAN
11 PsiBlast_PDB 37.37100%-129 - C1 -6S4N 10.7 NR1H2_HUMAN
58 Blastp_CBE 36.6698%-130 - C1 -5HJP 10.1 NR1H2_HUMAN
46 Blastp_CBE 36.2898%-127 - C1 -5I4V 8.9 NCOA2_HUMAN (first)
39 Blastp_CBE 36.01100%-129 - C1 -6S4U 8.6 NR1H2_HUMAN
56 Blastp_CBE 35.8196%-114 - C1 -6K9G 10.8 NR1H2_HUMAN
6 PsiBlast_PDB 35.70100%-129 - C1 -1PQC - NR1H2_HUMAN -
18 PsiBlast_PDB 35.4297%-119 - C1 -5KYJ 9.0 NR1H2_HUMAN
10 PsiBlast_PDB 35.4199%-121 - C1 -1P8D 9.1 NR1H2_HUMAN
36 Blastp_CBE 34.9399%-119 - C1 -1P8D 9.2 NR1H2_HUMAN
60 Blastp_CBE 34.6298%-132 - C1 -4DK7 6.9 NR1H2_HUMAN
22 Blastp_CBE 34.33100%-128 - C1 -3KFC 9.6 NR1H2_HUMAN
16 PsiBlast_PDB 34.3096%-125 - C1 -6JIO 5.5 NR1H2_HUMAN
29 Blastp_CBE 34.25100%-123 - C1 -1PQ9 5.9 NR1H2_HUMAN
14 PsiBlast_PDB 34.1498%-128 - C1 -4DK8 9.1 NR1H2_HUMAN
23 Blastp_CBE 34.11100%-127 - C1 -3KFC 10.5 NR1H2_HUMAN
43 Blastp_CBE 33.9999%-131 - C1 -4DK8 8.7 NR1H2_HUMAN
17 PsiBlast_PDB 33.9397%-124 - C1 -5KYA 9.2 NR1H2_HUMAN
35 Blastp_CBE 33.9298%-130 - C1 -4RAK 11.9 NR1H2_HUMAN
26 Blastp_CBE 33.37100%-121 - C1 -1PQC 8.6 NR1H2_HUMAN
49 Blastp_CBE 33.3596%-132 - C1 -6K9M 7.5 NR1H2_HUMAN
25 Blastp_CBE 33.11100%-127 - C1 -1PQC 8.2 NR1H2_HUMAN
47 Blastp_CBE 32.9396%-118 - C1 -6K9M 6.7 NR1H2_HUMAN
57 Blastp_CBE 32.9196%-117 - C1 -6JIO 5.1 NR1H2_HUMAN
34 Blastp_CBE 31.7898%-131 - C1 -5JY3 11.6 NR1H2_HUMAN
59 Blastp_CBE 31.6798%-130 * C1 *4DK7 7.1 NR1H2_HUMAN
44 Blastp_CBE 31.5197%-118 - C1 -5KYJ 8.8 NR1H2_HUMAN
53 Blastp_CBE 31.4996%-140 - C1 -6K9G 10.8 NR1H2_HUMAN
32 Blastp_CBE 31.3998%-130 - C1 -5JY3 11.7 NR1H2_HUMAN
50 Blastp_CBE 31.2796%-124 - C1 -6K9M 7.0 NR1H2_HUMAN
28 Blastp_CBE 31.02100%-121 - C1 -1PQ9 5.8 NR1H2_HUMAN
24 Blastp_CBE 30.10100%-150 - C1 -1PQC 3.3 NR1H2_HUMAN
54 Blastp_CBE 29.9096%-141 - C1 -6K9G 10.7 NR1H2_HUMAN
27 Blastp_CBE 29.76100%-152 - C1 -1PQ9 6.0 NR1H2_HUMAN
40 Blastp_CBE 29.15100%-126 - C1 -6S4N 11.0 NR1H2_HUMAN
42 Blastp_CBE 28.09100%-114 - C1 -6S4N 9.5 NR1H2_HUMAN
37 Blastp_CBE 26.46100%-133 - C1 -6S5K 11.0 NR1H2_HUMAN
55 Blastp_CBE 25.4896%-127 - C1 -6K9G 10.7 NR1H2_HUMAN
51 Blastp_CBE 22.0396%-137 - C1 -6K9H 7.6 NR1H2_HUMAN
48 Blastp_CBE 21.8496%-114 - C1 -6K9M 6.4 NR1H2_HUMAN
8 PsiBlast_PDB 20.7897%-118 - C1 -4RAK 2.4 NR1H2_HUMAN
9 PsiBlast_PDB 18.5197%-127 - C1 -5JY3 10.7 NR1H2_HUMAN
52 Blastp_CBE 17.5996%-126 - C1 -6K9H 8.3 NR1H2_HUMAN
33 Blastp_CBE 15.8298%-126 - C1 -5JY3 11.3 NR1H2_HUMAN