@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR1I1_VDR: (2021-05-27 )
MEAMAASTSLPDPGDFDRNVPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKDSLRPKLSEEQQRIIAILLDAHHKTYDPTYSDFCQFRPPVRVNDGGGSHPSRPNSRHTPSFSGDSSSSCSDHCITSSDMMDSSSFSNLDLSEEDSDDPSVTLELSQLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSEDQIVLLKSSAIEVIMLRSNESFTMDDMSWTCGNQDYKYRVSDVTKAGHSLELIEPLIKFQVGLKKLNLHEEEHVLLMAICIVSPDRPGVQDAALIEAIQDRLSNTLQTYIRCRHPPPGSHLLYAKMIQKLADLRSLNEEHSKQYRCLSFQPECSMKLTPLVLEVFGNEIS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMV_A_2(3TKC)
?
[Raw transfer]




MVD_B_2(2HB8)
VDR_HUMAN
[Raw transfer]




FMV_A_2(3OGT)
VDR_HUMAN
[Raw transfer]




O1C_B_2(2HB7)
VDR_HUMAN
[Raw transfer]




C33_B_2(2HAM)
VDR_HUMAN
[Raw transfer]




KH1_B_2(1IE8)
VDR_HUMAN
[Raw transfer]




EB1_B_2(1S0Z)
VDR_HUMAN
[Raw transfer]




VDX_B_2(1DB1)
VDR_HUMAN
[Raw transfer]




VDX_B_2(1IE9)
VDR_HUMAN
[Raw transfer]




TX5_B_2(1TXI)
VDR_HUMAN
[Raw transfer]




C3O_B_2(2HAS)
VDR_HUMAN
[Raw transfer]




OCC_B_2(2HAR)
VDR_HUMAN
[Raw transfer]




2MV_X_2(3A3Z)
VDR_HUMAN
[Raw transfer]




COV_A_2(3CS4)
VDR_HUMAN
[Raw transfer]




23R_X_2(3A40)
VDR_HUMAN
[Raw transfer]




0CO_A_2(3CS6)
VDR_HUMAN
[Raw transfer]




ZNE_A_2(3KPZ)
VDR_HUMAN
[Raw transfer]




MC9_B_2(1S19)
VDR_HUMAN
[Raw transfer]




3EV_A_2(3A78)
VDR_HUMAN
[Raw transfer]




0VQ_A_2(4G2I)
VDR_HUMAN
[Raw transfer]




18 PsiBlast_PDB 86.5083%-118 - C1 -3A3Z 11.8 VDR_HUMAN
20 PsiBlast_PDB 78.5783%-117 - C1 -3A78 10.8 VDR_HUMAN
19 PsiBlast_PDB 76.9183%-117 - C1 -3A40 11.8 VDR_HUMAN
7 PsiBlast_PDB 76.1583%-123 - C1 -4G2I 11.8 VDR_HUMAN
9 PsiBlast_PDB 73.6683%-124 - C1 -1S19 10.8 VDR_HUMAN
15 PsiBlast_PDB 73.3783%-118 - C1 -2HB8 11.5 VDR_HUMAN
3 PsiBlast_PDB 72.0883%-115 - C1 -1IE9 11.2 VDR_HUMAN
6 PsiBlast_PDB 69.6783%-117 - C1 -3TKC 11.7 ?
10 PsiBlast_PDB 68.8083%-122 - C1 -1TXI 10.4 VDR_HUMAN
17 PsiBlast_PDB 68.7383%-115 - C1 -3CS6 11.3 VDR_HUMAN
4 PsiBlast_PDB 68.2783%-116 * C1 *3OGT 11.6 VDR_HUMAN
5 PsiBlast_PDB 68.2183%-121 - C1 -3KPZ 10.6 VDR_HUMAN
14 PsiBlast_PDB 68.0083%-117 - C1 -2HB7 12.4 VDR_HUMAN
8 PsiBlast_PDB 66.0483%-121 - C1 -1S0Z 11.4 VDR_HUMAN
16 PsiBlast_PDB 60.4883%-115 - C1 -3CS4 11.6 VDR_HUMAN
13 PsiBlast_PDB 34.7683%-119 - C1 -2HAS 12.1 VDR_HUMAN
11 PsiBlast_PDB 32.4583%-118 - C1 -2HAM 12.2 VDR_HUMAN
12 PsiBlast_PDB 31.9983%-122 - C1 -2HAR 12.4 VDR_HUMAN
1 PsiBlast_PDB 29.7283%-124 - C1 -1DB1 10.8 VDR_HUMAN
2 PsiBlast_PDB 14.8683%-119 - C1 -1IE8 11.2 VDR_HUMAN