@TOME V3
(Feb 2022)

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Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR1I3_CAR: (2021-05-27 )
MASREDELRNCVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCPACRLQKCLDAGMRKDMILSAEALALRRAKQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFEQFVQFRPPAHLFIHHQPLPTLAPVLPLVTHFADINTFMVLQVIKFTKDLPVFRSLPIEDQISLLKGAAVEICHIVLNTTFCLQTQNFLCGPLRYTIEDGARVSPTVGFQVEFLELLFHFHGTLRKLQLQEPEYVLLAAMALFSPDRPGVTQRDEIDQLQEEMALTLQSYIKGQQRRPRDRFLYAKLLGLLAELRSINEAYGYQIQHIQGLSAMMPLLQEICS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CID_D_11(1XVP)
NR1I3_HUMAN
[Raw transfer]




ATE_C_3(1XNX)
NR1I3_MOUSE
[Raw transfer]




1 PsiBlast_PDB 89.3498%-184 - C1 -1XV9 - NR1I3_HUMAN -
21 Blastp_CBE 87.3598%-180 - C1 -1XVP 9.7 NR1I3_HUMAN
2 PsiBlast_PDB 87.0698%-176 - C1 -1XVP - NR1I3_HUMAN -
4 PsiBlast_PDB 72.1569%-182 - C1 -1XLS - NR1I3_MOUSE -
3 PsiBlast_PDB 50.3368%-167 - C1 -1XNX 6.5 NR1I3_MOUSE
16 PsiBlast_PDB 27.8747%-187 - C1 -4S0T - NR1I2_HUMAN -
19 PsiBlast_PDB 26.2347%-189 * C1 *4NY9 - NR1I2_HUMAN -
15 PsiBlast_PDB 23.5047%-185 - C1 -4XHD - NR1I2_HUMAN -
18 PsiBlast_PDB 23.3447%-186 - C1 -5A86 - NR1I2_HUMAN -
7 PsiBlast_PDB 23.2947%-183 - C1 -1M13 - NR1I2_HUMAN -
12 PsiBlast_PDB 22.5947%-179 - C1 -4X1G - NR1I2_HUMAN -
8 PsiBlast_PDB 22.2847%-181 - C1 -1NRL - NR1I2_HUMAN -
14 PsiBlast_PDB 21.0247%-184 - C1 -1SKX - NR1I2_HUMAN -
13 PsiBlast_PDB 19.4347%-182 - C1 -4XAO - NR1I2_HUMAN -
17 PsiBlast_PDB 18.5547%-179 - C1 -4S0S - NR1I2_HUMAN -
5 PsiBlast_PDB 15.8447%-173 - C1 -1ILG - NR1I2_HUMAN -
10 PsiBlast_PDB 15.5847%-178 - C1 -3R8D - NR1I2_HUMAN -
9 PsiBlast_PDB 15.1647%-178 - C1 -2QNV - NR1I2_HUMAN -
11 PsiBlast_PDB 14.2447%-178 - C1 -4X1F - NR1I2_HUMAN -
6 PsiBlast_PDB 12.7847%-173 - C1 -1ILH - NR1I2_HUMAN -