@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR3B1_ERRa: (2021-05-27 )
MSSQVVGIEPLYIKAEPASPDSPKGSSETETEPPVALAPGPAPTRCLPGHKEEEDGEGAGPGEQGGGKLVLSSLPKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFPAGPLAVAGGPRKTAAPVNALVSHLLVVEPEKLYAMPDPAGPDGHLPAVATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGARAAGLGELGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHEALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLFLEMLEAMMD

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

047_A_3(2PJL)
ERR1_HUMAN
[Raw transfer]




047_B_4(2PJL)
ERR1_HUMAN
[Raw transfer]




OHT_A_2(2GPU)

[Raw transfer]




H3W_A_2(6I61)
ERR3_HUMAN
[Raw transfer]




2OH_A_2(6I63)
ERR3_HUMAN
[Raw transfer]




TXF_A_6(2EWP)
ERR3_HUMAN
[Raw transfer]




H4Q_A_2(6I66)
ERR3_HUMAN
[Raw transfer]




90C_A_4(5YSO)
ERR3_HUMAN
[Raw transfer]




9S6_A_4(6A6K)
ERR3_HUMAN
[Raw transfer]




H3Z_A_2(6I65)
ERR3_HUMAN
[Raw transfer]




H48_A_2(6I64)
ERR3_HUMAN
[Raw transfer]




DES_E_5(1S9P)
ERR3_MOUSE
[Raw transfer]




GOL_A_3(6I66)
ERR3_HUMAN
[Raw transfer]




1BA_A_5(2GPP)
ERR3_HUMAN
[Raw transfer]




27N_A_2(6I62)
ERR3_HUMAN
[Raw transfer]




GOL_A_3(6I64)
ERR3_HUMAN
[Raw transfer]




5FB_A_2(3K6P)
ERR1_HUMAN
[Raw transfer]




1 PsiBlast_PDB 63.28100%-152 - C1 -3K6P 6.9 ERR1_HUMAN
2 PsiBlast_PDB 53.84100%-167 - C1 -1XB7 - ERR1_HUMAN -
4 PsiBlast_PDB 51.7895%-165 - C1 -3D24 - ERR1_HUMAN -
19 PsiBlast_PDB 50.7959%-137 * C1 *6I65 4.5 ERR3_HUMAN
8 PsiBlast_PDB 49.4662%-139 - C1 -2GP7 - ERR3_HUMAN -
14 PsiBlast_PDB 46.4762%-136 - C1 -2EWP 8.1 ERR3_HUMAN
10 PsiBlast_PDB 46.2662%-135 - C1 -2GPP 7.7 ERR3_HUMAN
15 PsiBlast_PDB 46.1362%-133 - C1 -6I62 6.2 ERR3_HUMAN
16 PsiBlast_PDB 45.1062%-139 - C1 -6I63 7.0 ERR3_HUMAN
7 PsiBlast_PDB 44.9562%-143 - C1 -1KV6 - ERR3_HUMAN -
20 PsiBlast_PDB 43.8359%-135 - C1 -6I66 4.7 ERR3_HUMAN
18 PsiBlast_PDB 42.8859%-134 - C1 -6I64 6.4 ERR3_HUMAN
17 PsiBlast_PDB 39.0059%-132 - C1 -6I61 7.4 ERR3_HUMAN
9 PsiBlast_PDB 38.9462%-135 - C1 -2GPO - -
11 PsiBlast_PDB 38.4662%-138 - C1 -2GPU 7.9
5 PsiBlast_PDB 36.4962%-139 - C1 -5YSO 7.7 ERR3_HUMAN
22 Blastp_CBE 36.1599%-149 - C1 -2PJL 9.3 ERR1_HUMAN
3 PsiBlast_PDB 34.1899%-151 - C1 -2PJL 9.4 ERR1_HUMAN
6 PsiBlast_PDB 26.7662%-140 - C1 -6A6K 7.3 ERR3_HUMAN
12 PsiBlast_PDB 25.3962%-125 - C1 -2GPV - ERR3_HUMAN -
13 PsiBlast_PDB 15.7162%-122 - C1 -1S9P 7.0 ERR3_MOUSE