Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTAPWVALALLWGSLCAGSGRGEAETRECIYYNANWELERTNQSGLERCEGEQDKRLHCYASWRNSSGTIELVKKGCWLDDFNCYDRQECVATEENPQVYFCCCEGNFCNERFTHLPEAGGPEVTYEPPPTAPTLLTVLAYSLLPIGGLSLIVLLAFWMYRHRKPPYGHVDIHEDPGPPPPSPLVGLKPLQLLEIKARGRFGCVWKAQLMNDFVAVKIFPLQ--DKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLK----GNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHPSLEELQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAEARLSAGCVEERVSLIRRSVNGTTSDCLVSLVTSVTNVDLPPKESSI
6N8G Chain:B ((32-225))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGFGVVYKGYVNNTTVAVKKLA--TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGD----DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN--------HH---IHRDIKSANILLDEAFTAKISDFGLA---RASEKFAQ--RIVGTTAYMAPEALRGEIT------PKSDIYSFGVVLLEIITGLPAVD------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 6N8G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 839 -4004 -4.77 -22.62
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain B : 0.61

3D Compatibility (PKB) : -4.77
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.085

(partial model without unconserved sides chains):
PDB file : Tito_6N8G.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-6n8g-query.scw
PDB file : Tito_Scwrl_6N8G.pdb: