Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTAPWVALALLWGSLCAGSGRGEAETRECIYYNANWELERTNQSGLERCEGEQDKRLHCYASWRNSSGTIELVKKGCWLDDFNCYDRQECVATEENPQVYFCCCEGNFCNERFTHLPEAGGPEVTYEPPPTAPTLLTVLAYSLLPIGGLSLIVLLAFWMYRHRKPPYGHVDIHEDPGPPPPSPLVGLKPLQLLEIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLK---GNI-ITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHPSLEELQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAEARLSAGCVEERVSLIRRSVNGTTSDCLVSLVTSVTNVDLPPKESSI
5W84 Chain:B ((40-233))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGFGVVYKGYVNNTTVAVK------------DQEIKVMAKCQHENLVELLGFS----------CLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN--------HH---IHRDIKSANILLDEAFTAKISDFGLA---RASEKFAQ--RIVGTTAYMAPEALRGEIT------PKSDIYSFGVVLLEIITGLPAVD------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5W84.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 733 -5777 -7.88 -35.88
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.61

3D Compatibility (PKB) : -7.88
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.082

(partial model without unconserved sides chains):
PDB file : Tito_5W84.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5w84-query.scw
PDB file : Tito_Scwrl_5W84.pdb: