Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGAAAKLAFAVFLISCSSGAILGRSETQECLFFNANWEKDRTNQTGVEPCYGDKDKRRHCFATWKNISGSIEIVKQGCWLDDINCYDRTDCVEKKDSPEVYFCCCEGNMCNEKFSYFPEMEVTQPTSNPVTPKPPYYNILLYSLVPLMLIAGIVICAFWVYRHHKMAYPPVLVPTQDPGPPPPSPLLGLKPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWN--ELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLTNIITTEDIVTVVTMVTNVDFPPKESSL
5HIE Chain:C ((47-227))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSFGTVYKGKWHGD-VAVKMLTPQQLQAFKNEVGV--LRKTRHVNILLFMGY-----STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA----------KSIIHRDLKSNNIFLHEDLTVKIGDFG----------------LSGSILWMAPEVIR--MQDKNPYSFQSDVYAFGIVLYELMT------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5HIE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 746 -42261 -56.65 -259.27
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain C : 0.61

3D Compatibility (PKB) : -56.65
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.101

(partial model without unconserved sides chains):
PDB file : Tito_5HIE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5hie-query.scw
PDB file : Tito_Scwrl_5HIE.pdb: