Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMGAAAKLAFAVFLISCSSGAILGRSETQECLFFNANWEKDRTNQTGVEPCYGDKDKRRHCFATWKNISGSIEIVKQGCWLDDINCYDRTDCVEKKDSPEVYFCCCEGNMCNEKFSYFPEMEVTQPTSNPVTPKPPYYNILLYSLVPLMLIAGIVICAFWVYRHHKMAYPPVLVPTQDPGPPPPSPLLGLKPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPI-----QDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSW--NELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLTNIITTEDIVTVVTMVTNVDFPPKESSL
5CSW Chain:B ((25-210))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGV--LRKTRHVNILLFMG-----YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK----------SIIHRDLKSNNIFLHEDNTVKIGDFGL------------------SILWMAPEVIR-------PYSFQSDVYAFGIVLYELMT------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5CSW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 656 -18109 -27.60 -116.08
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.61

3D Compatibility (PKB) : -27.60
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.120

(partial model without unconserved sides chains):
PDB file : Tito_5CSW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5csw-query.scw
PDB file : Tito_Scwrl_5CSW.pdb: