Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMGAAAKLAFAVFLISCSSGAILGRSETQECLFFNANWEKDRTNQTGVEPCYGDKDKRRHCFATWKNISGSIEIVKQGCWLDDINCYDRTDCVEKKDSPEVYFCCCEGNMCNEKFSYFPEMEVTQPTSNPVTPKPPYYNILLYSLVPLMLIAGIVICAFWVYRHHKMAYPPVLVPTQDPGPPPPSPLLGLKPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPI-----QDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWN--ELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLTNIITTEDIVTVVTMVTNVDFPPKESSL
5C9C Chain:B ((47-232))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGV--LRKTRHVNILLFMGY-----STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA----------KSIIHRDLKSNNIFLHEDLTVKIGDFGL------------------SILWMAPEVIR--M---NPYSFQSDVYAFGIVLYELMT------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5C9C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 660 -33564 -50.85 -212.43
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain B : 0.61

3D Compatibility (PKB) : -50.85
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.110

(partial model without unconserved sides chains):
PDB file : Tito_5C9C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5c9c-query.scw
PDB file : Tito_Scwrl_5C9C.pdb: