Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDRSKENCISGPVKATAPVGGPKRVLVTQQFPCQNPLPVNSGQAQRVLCPSNSSQRVPLQAQKLVSSHKPVQNQKQKQLQATSVPHPVSRPLNNTQKSKQPLPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREK--QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA----NTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR-----PMLREVLEHPWITANSSKPSNCQNKESASKQS
6C0T Chain:A ((33-295))---------------------------------------------------------------------------------------------------------------------------------LSDFNIIDTLGVGGFGRVELVQLKSEESK-TFAMKILKKRHIVDTRQQEHIRSEKQIMQGAHSDFIVRLYRTFKDSKYLYMLMEACLGGELWTILRDRGSFEDSTTRFYTACVVEAFAYLHSKGIIYRDLKPENLILDHRGYAKLVDFGFAKKIGFGKKTWFCGTPEYVAPEIILNKGHDISADYWSLGILMYELLTGSPPFSGPDPMKTYNIILRGIDMIE--FPKKIAKNAANLIKKLCRDNPSERLGNLKNGVKDIQKHKWF--------------------


General information:
TITO was launched using:
RESULT:

Template: 6C0T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1247 6269 5.03 24.97
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : 5.03
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.280

(partial model without unconserved sides chains):
PDB file : Tito_6C0T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-6c0t-query.scw
PDB file : Tito_Scwrl_6C0T.pdb: