Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEPPRGPPANGAEPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCVVYRLIKGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLFHGFRCQTCGYKFHQHCSSKVPTVCVDMSTNRQQFYHSVQDLSGGSRQHEAPSNRPLNELLTPQGPSPRTQHCDPEHFPFPAPANAPLQRIRSTSTPNVHMVSTTAPMDSNLIQLTGQSFSTDAAGSRGGSDGTPRGSPSPASVSSGRKSPHSKSPAEQRERKSLADDKKKVKNLGYRDSGYYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGD-VAVKVLKVSQPTAE-QAQAFKNEMQVLRKTRHVNILLFMG-FMTRPG-FAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYLH--AKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRMQDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGCRDQIIFMVGRGYLSPDLSKISSNCPKAMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHRTQADELPACLLSAARLVP
4YFI Chain:C ((61-320))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SEIEFHEIIGSGSFGKVYKGRCRNKIVAIKRYR-------SDVDMFCREVSILCQLNHPCVIQFVGACLNDPSQFAIVTQYISGGSLFSLLHEQKRILDLQSKLIIAVDVAKGMEYLHNLTQPIIHRDLNSHNILLYEDGHAVVADFGESRFLQS-----------GNLRWMAPEV--FTQCTRYTIKADVFSYALCLWEILTGEIPFAHLKPAAADMDMAYHHIRPP----IGYSIPKPISSLLIRGWNACPEGRPEFSEVVMKLE--------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4YFI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1056 -30609 -28.99 -129.15
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain C : 0.64

3D Compatibility (PKB) : -28.99
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.140

(partial model without unconserved sides chains):
PDB file : Tito_4YFI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4yfi-query.scw
PDB file : Tito_Scwrl_4YFI.pdb: