Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMEPPRGPPANGAEPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCVVYRLIKGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLFHGFRCQTCGYKFHQHCSSKVPTVCVDMSTNRQQFYHSVQDLSGGSRQHEAPSNRPLNELLTPQGPSPRTQHCDPEHFPFPAPANAPLQRIRSTSTPNVHMVSTTAPMDSNLIQLTGQSFSTDAAGSRGGSDGTPRGSPSPASVSSGRKSPHSKSPAEQRERKSLADDKKKVKNLGYRDSGYYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGD-VAVKVLKVSQPTAE-QAQAFKNEMQVLRKTRHVNILLFMG-FMTRPG-FAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYLH--AKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRMQDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGCRDQIIFMVGRGYLSPDLSKISSNCPKAMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHRTQADELPACLLSAARLVP
4YFF Chain:D ((42-301))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SEIEFHEIIGSGSFGKVYKGRCRNKIVAIKRY--------SDVDMFCREVSILCQLNHPCVIQFVGACLNDPSQFAIVTQYISGGSLFSLLHEQKRILDLQSKLIIAVDVAKGMEYLHNLTQPIIHRDLNSHNILLYEDGHAVVADFGESRFLQS-----------GNLRWMAPEV--FTQCTRYTIKADVFSYALCLWEILTGEIPFAHLKPAAAAADMAYHHIRPP----IGYSIPKPISSLLIRGWNACPEGRPEFSEVVMKLE--------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4YFF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1026 -28096 -27.38 -119.05
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain D : 0.64

3D Compatibility (PKB) : -27.38
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.139

(partial model without unconserved sides chains):
PDB file : Tito_4YFF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4yff-query.scw
PDB file : Tito_Scwrl_4YFF.pdb: