Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MNEVSVIKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKERPEAPDQTLPPLNNFSVAECQLMKTERPRPNTFVIRCLQWTTVIERTFHVDSPDEREEWMRAIQMVANSLKQRAPGEDPMDYKCGSPSDSSTTEEMEVAVSKARAKVTMNDFDYLKLLGKG-TFGKVILVREKAT-GRYYAMKILRKEVIIAKDEVAHTVTESRVLQ--NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR-ERVFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLD-KDGHIKITDFGLCKEGISDGATMK--TFCGTPEYLAPEVLEDN---DYGRAVDWWGLGVVMYEMMCG-RLPFY--NQDHERLFELILMEEIRFP-RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN---WQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDRYDSLGLLELDQRTHFPQFSYSASIRE 1CDK Chain:A ((8-350)) ------------------------------------------------------------------------------------------------------KGSEQESVKEFLAKAKEDFLKKWENPAQNTA------H--------LDQFERIKTLGT-GSFGRVMLVKHKETG-NHFAMKILDKQKVVKLKQIEHTLNEKRILQAV--NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHS-LDLIYRDLKPENLLIDQ-QGYIQVTDFGFAKRV-K--G--RTWTLCGTPEYLAPEIILS-KGY--NKAVDWWALGVLIYEMAAGY-PPFFAD--QPIQIYEKIVSGKVRFPS-HFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFA---TTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVSI--------NEKCGKEFSEF-----------

General information: TITO was launched using: RESULT: Template: 1CDK.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1667 -808 -0.48 -2.49 target 2D structure prediction score : 0.55 Monomeric hydrophicity matching model chain A : 0.71 3D Compatibility (PKB) : -0.48 2D Compatibility (Sec. Struct. Predict.) : 0.55 1D Compatibility (Hydrophobicity) : 0.71 QMean score : 0.291

(partial model without unconserved sides chains): PDB file : Tito_1CDK.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1cdk-query.scw PDB file : Tito_Scwrl_1CDK.pdb: