Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMEPPRGPPANGAEPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCVVYRLIKGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLFHGFRCQTCGYKFHQHCSSKVPTVCVDMSTNRQQFYHSVQDLSGGSRQHEAPSNRPLNELLTPQGPSPRTQHCDPEHFPFPAPANAPLQRIRSTSTPNVHMVSTTAPMDSNLIQLTGQSFSTDAAGSRGGSDGTPRGSPSPASVSSGRKSPHSKSPAEQRERKSLADDKKKVKNLGYRDSGYYWEVPPSEVQLLKRIGTGSFGTVFRGRWHG-DVAVKVLKVSQPTAEQAQAFKNEMQVLRKTRHVNILLFMGFMTR--PGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYLHA--KNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRMQDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGCRDQIIFMVGRGYLSPDLSKISSNCPKAMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHRTQADELPACLLSAARLVP
4YFI Chain:C ((57-326))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HLQLSEIEFHEIIGSGSFGKVYKGRCRNKIVAIKRYR------SDVDMFCREVSILCQLNHPCVIQFVGACLNDPSQFAIVTQYISGGSLFSLLHEQKRILDLQSKLIIAVDVAKGMEYLHNLTQPIIHRDLNSHNILLYEDGHAVVADFGESRFLQS-----------GNLRWMAPEVFTQC--TRYTIKADVFSYALCLWEILTGEIPFAHLKPAAADMDMAYHHI-RP---PIGYSIPKPISSLLIRGWNACPEGRPEFSEVVMKLEECLCNI--------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4YFI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1152 -55433 -48.12 -223.52
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain C : 0.64

3D Compatibility (PKB) : -48.12
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.157

(partial model without unconserved sides chains):
PDB file : Tito_4YFI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4yfi-query.scw
PDB file : Tito_Scwrl_4YFI.pdb: