Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSTSQPGACPCQGAASRPAILYALLSSSLKAVPRPRSRCLCRQHRPVQLCAPHRTCREALDVLAKTVAFLRNLPSFWQLPPQDQRRLLQGCWGPLFLLGLAQDAVTFEVAEAPVPSILKKILLEEPSSSGGSGQLPDRPQPSL--AAVQWLQCCLESFWSLELSPKEYACLKGTILFN---PDVPGLQAASHIGHLQQEAHWVLCEVLEPWCPAAQGRLTRVLLTASTLKSIPTSLLGDLFFRPIIGDVDIAGLLGDMLLLR
4XAJ Chain:A ((379-572))-------------------------------------------------------CESAARLLFMSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAI-------PVDA---NTLL---AVSGMNGDNTDSQRLTLIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVP--LRSFRNAAAIAALQDEAQLTLNSYIHTRYPTQPVRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITRLLSDM----


General information:
TITO was launched using:
RESULT:

Template: 4XAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 705 -58098 -82.41 -317.47
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -82.41
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.355

(partial model without unconserved sides chains):
PDB file : Tito_4XAJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4xaj-query.scw
PDB file : Tito_Scwrl_4XAJ.pdb: